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% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/docdata.R
\docType{data}
\name{segments.alphabets}
\alias{segments.alphabets}
\alias{HUMAN_TRAV}
\alias{genealphabets}
\alias{HUMAN_TRAJ}
\alias{HUMAN_TRBV}
\alias{HUMAN_TRBD}
\alias{HUMAN_TRBJ}
\alias{HUMAN_TRBV_MITCR}
\alias{HUMAN_TRGV}
\alias{HUMAN_TRGJ}
\alias{HUMAN_TRDV}
\alias{HUMAN_TRDD}
\alias{HUMAN_TRDJ}
\alias{HUMAN_IGHV}
\alias{HUMAN_IGHD}
\alias{HUMAN_IGHJ}
\alias{HUMAN_IGKV}
\alias{HUMAN_IGKJ}
\alias{HUMAN_IGLJ}
\alias{HUMAN_IGLV}
\alias{HUMAN_TRBV_ALS}
\alias{HUMAN_TRBV_FAM}
\alias{HUMAN_TRBV_GEN}
\alias{MACMUL_TRBJ}
\alias{MACMUL_TRBV}
\alias{MOUSE_TRBJ}
\alias{MOUSE_TRBV}
\alias{MOUSE_TRAV}
\alias{MOUSE_TRAJ}
\alias{MOUSE_IGKV}
\alias{MOUSE_IGKJ}
\alias{MOUSE_IGHV}
\alias{MOUSE_IGHD}
\alias{MOUSE_IGHJ}
\alias{MOUSE_TRDD}
\alias{MOUSE_TRDV}
\alias{MOUSE_TRDJ}
\alias{MOUSE_TRGV}
\alias{MOUSE_TRGJ}
\alias{MOUSE_IGLJ}
\alias{MOUSE_IGLV}
\title{Alphabets of TCR and Ig gene segments.}
\format{
Each \code{<SPECIES>_<GENES>} is a character vector. <SPECIES> is an identifier of species, <GENES> is concatenated three
identifiers of cell type ("TR**" for TCR, "IG**" for Ig), chain (e.g., "**A*" for alpha chains) and gene segment ("***V" for V(ariable) gene segment,
"***J" for J(oining) gene segment, "***D" for D(iversity) gene segment).
}
\usage{
HUMAN_TRAV
HUMAN_TRAJ
HUMAN_TRBV
HUMAN_TRBD
HUMAN_TRBJ
HUMAN_TRBV_MITCR
HUMAN_TRBV_ALS
HUMAN_TRGV
HUMAN_TRGJ
HUMAN_TRDV
HUMAN_TRDD
HUMAN_TRDJ
MOUSE_TRBV
MOUSE_TRBJ
MOUSE_TRAV
MOUSE_TRAJ
MOUSE_IGKV
MOUSE_IGKJ
MOUSE_IGHV
MOUSE_IGHD
MOUSE_IGHJ
MACMUL_TRBV
MACMUL_TRBJ
HUMAN_IGHV
HUMAN_IGHD
HUMAN_IGHJ
HUMAN_IGLV
HUMAN_IGLJ
MOUSE_IGLJ
MOUSE_IGLV
}
\description{
Character vector with names for segments. With \code{tcR} we provided alphabets for all alpha, beta,
gamma and delta chains gene segments.
}
\examples{
\dontrun{
HUMAN_TRBV[1] # => "TRBV10-1"
}
}
\keyword{datasets}
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