1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
|
\name{TFMPvalue-package}
\alias{TFMPvalue-package}
\docType{package}
\title{
Efficient and accurate P-value computation for Position Weight Matrices
}
\description{
This package provides a novel algorithm that solves the P-value calculation
problem given the score based on a Postion Weight Matrices (PWMs),
or the reverse problem: finding the score give the desired P-value.
This package is an interface to code originally made available by
Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15.
}
\details{
The original code is taken from
\url{http://bioinfo.lifl.fr/TFM/TFMpvalue/TFM-Pvalue.tar.gz},
retrived 26/03/2014.
The algorithm is described in Touzet, H., and Varre, J.-S. (2007).
Efficient and accurate P-value computation for Position Weight Matrices.
Algorithms Mol Biol 2, 15.
}
\author{
Ge Tan
}
\keyword{package}
|