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useDynLib(timereg)
import(survival)
import(numDeriv)
import(lava)
export("aalen", ## {{{
"aalen.des",
"aalen.des2",
"aalenBase",
"aalenBaseC",
### "additive.pls",
"additive.compSs",
### "additive.plsR",
"check.missing",
"rm.missing",
"cluster.index.timereg",
"coefBase",
"cox.ipw",
"coefcox",
"cox.marg",
"comp.risk",
"comprisk.ipw",
"const",
"cox",
"cox.aalen",
"cox.aalenBase",
"cum.residuals",
"Cpred",
"Csmooth2B",
"CsmoothB",
"cum.residuals",
### "cv.folds",
"dynreg",
"dynregBase",
"Event",
"event.split",
"as.matrix.Event",
"as.character.Event",
"format.Event",
"print.Event",
"summary.Event",
"rbind.Event",
"[.Event",
"Gprop.odds",
### "Gprop.odds.subdist",
"is.diag",
### "invsubdist",
### "subdist",
"krylow.pls",
"kmplot",
"localTimeReg",
"nameestimate",
"namematrix",
"names2formula",
"pava.pred",
"pe.sasieni",
"percen",
"plotConfregion",
"pred.cum",
"pred.des",
"predictpropodds",
### "summary.pls",
"prep.comp.risk",
### "pre.cifs",
"prep.glm.comprisk",
"pred.stratKM",
"prop", "prop.excess", "prop.excessBase",
"prop.odds",
### "prop.odds.gam",
"prop.odds.subdist",
"prop.odds.subdist.ipw",
"pval",
"pava",
"qcut",
"res.mean",
### "rchaz",
### "rcrisk",
"recurrent.marginal.mean",
"recurrent.marginal.coxmean",
"read.design",
"read.surv",
### "read.fit",
"residualsTimereg",
"restricted.residual.mean",
"semiaalen",
"semicox",
"semiregBase",
"sindex.prodlim",
### "simsubdist",
### "setup.cif",
### "pls.surv.cv",
### "pc.hazard",
### "pchazard.sim",
### "simrchaz",
### "sim.cif",
### "sim.cifs",
### "sim.cifsRestrict",
### "sim.cox",
### "sim.base",
### "sim.cause.cox",
"timecox",
"timecoxBase",
"timetest",
"timereg.formula",
"two.stage",
"wald.test"
) ## }}}
S3method(coef,comprisk.ipw)
S3method(print,comprisk.ipw)
S3method(summary,comprisk.ipw)
export("coef.comprisk.ipw","print.comprisk.ipw","summary.comprisk.ipw")
S3method(coef,cox.ipw)
S3method(print,cox.ipw)
S3method(summary,cox.ipw)
export("coef.cox.ipw","print.cox.ipw","summary.cox.ipw")
S3method(coef,cox.marg)
S3method(print,cox.marg)
S3method(summary,cox.marg)
export("coef.cox.marg","print.cox.marg","summary.cox.marg")
S3method(coef,resmean)
S3method(plot,resmean)
S3method(print,resmean)
S3method(summary,resmean)
export("coef.resmean","plot.resmean","print.resmean","summary.resmean")
S3method(plot,restricted.residual.mean)
S3method(summary,restricted.residual.mean)
export("plot.restricted.residual.mean","summary.restricted.residual.mean")
###S3method(print,restricted.residual.resmean)
###export("plot.restricted.residual.mean","print.restricted.residual.mean","summary.restricted.residual.mean")
S3method(plot,aalen)
S3method(plot,comprisk)
S3method(plot,cum.residuals)
S3method(plot,cox.aalen)
S3method(plot,dynreg)
S3method(plot,predict.timereg)
S3method(plot,prop.excess)
S3method(plot,timecox)
S3method(plot,two.stage)
S3method(plot,predict.timereg)
S3method(print,aalen)
S3method(print,cox.aalen)
S3method(print,comprisk)
S3method(print,cum.residuals)
S3method(print,dynreg)
S3method(print,pe.sasieni)
S3method(print,predict.timereg)
S3method(print,prop.excess)
S3method(print,timecox)
S3method(print,two.stage)
###S3method(print,pls)
S3method(summary,aalen)
S3method(summary,cox.aalen)
S3method(summary,comprisk)
S3method(summary,cum.residuals)
S3method(summary,dynreg)
S3method(summary,pe.sasieni)
S3method(summary,predict.timereg)
S3method(summary,prop.excess)
S3method(summary,timecox)
S3method(summary,two.stage)
###S3method(summary,pls)
S3method(predict,aalen)
S3method(predict,comprisk)
S3method(predict,cox.aalen)
S3method(predict,two.stage)
###S3method(predict,pls)
S3method(coef,aalen)
S3method(coef,cox.aalen)
S3method(coef,dynreg)
S3method(coef,timecox)
S3method(coef,two.stage)
S3method(print,Event)
S3method(summary,Event)
S3method(rbind,Event)
S3method(as.matrix,Event)
S3method(as.character,Event)
S3method(format,Event)
S3method("[",Event)
S3method(coef,comprisk)
S3method(predict,timereg)
S3method(plot,cums)
S3method(vcov,aalen)
S3method(vcov,cox.aalen)
###S3method(coef,dynreg)
###S3method(coef,timecox)
S3method(vcov,two.stage)
S3method(vcov,comp.risk)
export("plot.aalen",
"plot.comprisk",
"plot.cum.residuals",
"plot.cox.aalen",
"plot.cums",
"plotScore",
"plot.dynreg",
"plot.predict.timereg",
"plot.prop.excess",
"plot.timecox",
"plot.two.stage",
"print.aalen",
"print.cox.aalen",
"print.comprisk",
"print.cum.residuals",
"print.dynreg",
"print.pe.sasieni",
"print.predict.timereg",
"print.prop.excess",
"print.timecox",
"print.two.stage",
### "print.pls",
"summary.aalen",
"summary.cox.aalen",
"summary.comprisk",
"summary.cum.residuals",
"summary.dynreg",
"summary.pe.sasieni",
### "summary.pls",
"summary.predict.timereg",
"summary.prop.excess",
"summary.timecox",
"summary.two.stage",
"predict.aalen",
### "predict.pls",
"predict.comprisk",
"predict.timereg",
"predict.cox.aalen",
"predict.two.stage",
"predict.timereg",
"coef.aalen",
"coef.cox.aalen",
"coef.comprisk",
"coef.dynreg",
"coef.timecox",
"coef.two.stage",
"vcov.two.stage",
"vcov.comp.risk",
"vcov.cox.aalen",
"vcov.aalen"
)
importFrom("grDevices", "col2rgb", "rgb")
importFrom("graphics", "abline", "legend", "lines", "matplot", "plot", "points", "polygon", "title")
importFrom("stats", "approx", "as.formula", "coef", "delete.response", "formula", "glm", "model.extract", "model.frame",
"model.matrix", "na.omit","pchisq", "pnorm", "predict", "qnorm", "quantile", "runif", "terms", "time", "update")
importFrom("utils", "head","tail")
importFrom("stats", "rexp")
importFrom("stats", "rbinom")
importFrom("stats", "get_all_vars")
importFrom("stats", "vcov")
importFrom("methods", "hasArg")
importFrom("stats", "model.response", "model.weights")
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