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src/bit_array.c usr/share/rapmap/src
src/HitManager.cpp usr/share/rapmap/src
src/rank9b.cpp usr/share/rapmap/src
src/RapMapFileSystem.cpp usr/share/rapmap/src
src/RapMapSAIndex.cpp usr/share/rapmap/src
src/RapMapSAIndexer.cpp usr/share/rapmap/src
src/RapMapUtils.cpp usr/share/rapmap/src
include/bit_*.h usr/include/rapmap
include/kseq.h usr/include/rapmap
include/macros.h usr/include/rapmap
include/rank9b.h usr/include/rapmap
include/chobo usr/include/rapmap
include/digestpp usr/include/rapmap
include/sparsepp/spp.h usr/include/rapmap/sparsepp
include/sparsepp/spp_config.h usr/include/rapmap/sparsepp
include/sparsepp/spp_stdint.h usr/include/rapmap/sparsepp
include/sparsepp/spp_traits.h usr/include/rapmap/sparsepp
include/sparsepp/spp_utils.h usr/include/rapmap/sparsepp
include/Boo*.hpp usr/include/rapmap
include/FrugalBooMap.hpp usr/include/rapmap
include/HitManager.hpp usr/include/rapmap
include/IndexHeader.hpp usr/include/rapmap
include/Kmer.hpp usr/include/rapmap
include/PairAlignmentFormatter.hpp usr/include/rapmap
include/RapMapConfig.hpp usr/include/rapmap
include/RapMapFileSystem.hpp usr/include/rapmap
include/RapMapSAIndex.hpp usr/include/rapmap
include/RapMapUtils.hpp usr/include/rapmap
include/SACollector.hpp usr/include/rapmap
include/SASearcher.hpp usr/include/rapmap
include/ScopedTimer.hpp usr/include/rapmap
include/SingleAlignmentFormatter.hpp usr/include/rapmap
include/SparseHashSerializer.hpp usr/include/rapmap
include/SpinLock.hpp usr/include/rapmap
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