1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
|
Documentation
RasMol 2.7.4.1
Molecular Graphics Visualisation Tool
26 January 2008
Based on RasMol 2.6 by Roger Sayle
Biomolecular Structures Group, Glaxo Wellcome Research & Development
Stevenage, Hertfordshire, UK
Version 2.6, August 1995, Version 2.6.4, December 1998
Copyright (c) Roger Sayle 1992-1999
and Based on Mods by
+------------------------------------------------------------------------------+
| Author | Version, Date | Copyright |
|-------------------+----------------------+-----------------------------------|
| Arne Mueller | RasMol 2.6x1 May | (c) Arne Mueller 1998 |
| | 1998 | |
|-------------------+----------------------+-----------------------------------|
| Gary Grossman and | RasMol 2.5-ucb | (c) UC Regents/ModularCHEM |
| Marco Molinaro | November 1995 | Consortium 1995, 1996 |
| | RasMol 2.6-ucb | |
| | November 1996 | |
|-------------------+----------------------+-----------------------------------|
| Philippe Valadon | RasTop 1.3 August | (c) Philippe Valadon 2000 |
| | 2000 | |
|-------------------+----------------------+-----------------------------------|
| Herbert J. | RasMol 2.7.0 March | (c) Herbert J. Bernstein |
| Bernstein | 1999 | 1998-2008 |
| | RasMol 2.7.1 June | |
| | 1999 | |
| | RasMol 2.7.1.1 | |
| | January 2001 | |
| | RasMol 2.7.2 August | |
| | 2000 | |
| | RasMol 2.7.2.1 April | |
| | 2001 | |
| | RasMol 2.7.2.1.1 | |
| | January 2004 | |
| | RasMol 2.7.3 | |
| | February 2005 | |
| | RasMol 2.7.3.1 Apr | |
| | 06 | |
| | RasMol 2.7.4 Nov 07 | |
| | RasMol 2.7.4.1 Jan | |
| | 08 | |
+------------------------------------------------------------------------------+
RasMol 2.7.3 incorporates changes by Clarice Chigbo, Ricky Chachra, and
Mamoru Yamanishi. Work on RasMol 2.7.3 supported in part by grants
DBI-0203064, DBI-0315281 and EF-0312612 from the U.S. National Science
Foundation and grant DE-FG02-03ER63601 from the U.S. Department of Energy.
RasMol 2.7.4 incorporates changes by G. Todorov, Nan Jia, N. Darakev, P.
Kamburov, G. McQuillan, J. Jemilawon. Work on RasMol 2.7.4 supported in
part by grant 1R15GM078077-01 from the National Institute of General
Medical Sciences (NIGMS). The content is solely the responsibility of the
authors and does not necessarily represent the official views of the
funding organizations.
and Incorporating Translations by
+-----------------------------------------------------------------------------+
| Author | Item | Language |
|--------------------------------------+--------------------------+-----------|
| Isabel Servan Martinez, | 2.6 Manual | Spanish |
| Jose Miguel Fernandez Fernandez | | |
|--------------------------------------+--------------------------+-----------|
| Jose Miguel Fernandez Fernandez | 2.7.1 Manual | Spanish |
|--------------------------------------+--------------------------+-----------|
| Fernando Gabriel Ranea | 2.7.1 menus and messages | Spanish |
|--------------------------------------+--------------------------+-----------|
| Jean-Pierre Demailly | 2.7.1 menus and messages | French |
|--------------------------------------+--------------------------+-----------|
| Giuseppe Martini, Giovanni Paolella, | 2.7.1 menus and messages | Italian |
| A. Davassi, M. Masullo, C. Liotto | 2.7.1 help file | |
|--------------------------------------+--------------------------+-----------|
| G. Pozhvanov | 2.7.3 menus and messages | Russian |
|--------------------------------------+--------------------------+-----------|
| G. Todorov | 2.7.3 menus and messages | Bulgarian |
|--------------------------------------+--------------------------+-----------|
| Nan Jia, G. Todorov | 2.7.3 menus and messages | Chinese |
|--------------------------------------+--------------------------+-----------|
| Mamoru Yamanishi, Katajima Hajime | 2.7.3 menus and messages | Japanese |
+-----------------------------------------------------------------------------+
This Release by
Herbert J. Bernstein, Bernstein + Sons, 5 Brewster Lane, Bellport, NY, USA
yaya@bernstein-plus-sons.com
Copyright (c) Herbert J. Bernstein 1998-2008
The original RasMol manual was created by Roger Sayle. In July 1996, Dr.
Margaret Wong of the Chemistry Department, Swinburne University of
Technology, Australia, made extensive revisions to the RasMol 2.5 manual
to accurately reflect the operation of RasMol 2.6. Eric Martz of the
University of Massachusetts made further revisions. In May 1997, William
McClure of Carnegie Mellon University reorganized the HTML version of the
manual into multiple sections which could be downloaded quickly and added
use of frames. Portions of the 2.7.1 version of the RasMol manual were
derived with permission from William McClure's version using Roger Sayle's
rasmol.doc for version 2.6.4 as the primary source. Changes were made in
August 2000 for RasMol version 2.7.2, January 2001 for RasMol version
2.7.1.1 and April 2001 for RasMol version 2.7.2.1 and February 2005 for
RasMol version 2.7.3.
Documentation Last Updated 26 January 2008
Edited by Herbert J. Bernstein and Frances C. Bernstein
Translations
Thanks to the efforts of Jose Miguel Fernandez Fernandez (Departamento de
Bioquimica y Biologia Molecular. Universidad de Granada. Espana
(jmfernan@ugr.es)) a translation of the Manual for Rasmol version 2.7.1
into Spanish is now available. La traduccion espanola del manual de la
version de la Dra. Wong revisada por Eric Martz fue realizada por Isabel
Servan Martinez y Jose Miguel Fernandez Fernandez. La actual traduccion
del Manual de RasMol 2.7.1 ha sido realizada usando como base la anterior
de RasMol 2.6 por Jose Miguel Fernandez Fernandez.
Thanks to translations by Fernando Gabriel Ranea <davinci@dinamica.com.ar>
in late 2000 and early 2001, RasMol is now capable of rendering most menu
items and messages in Spanish. Jean-Pierre Demailly
<Jean-Pierre.Demailly@ujf-grenoble.fr> provided French translations of
menus and messages in January 2001. Giuseppe Martini
<martini@iigb.na.cnr.it> and Giovanni Paolella <paolella@dbbm.unina.it>
with contributions by A. Davassi, M. Masullo and C. Liotto provided
Italian translation of menus and messages in March 2001.
----------------------------------------------------------------------
THIS IS A PRELIMINARY RELEASE INVOLVING EXTENSIVE MODIFICATIONS
***** USE WITH CAUTION ******
----------------------------------------------------------------------
IMPORTANT
This version is based directly on RasMol version 2.7.4, on RasMol version
2.7.3.1, on RasMol vesion 2.7.3, on RasMol version 2.7.2.1.1, on RasMol
version 2.7.2, on RasMol version 2.7.1, on RasMol version 2.6_CIF.2, on
RasMol version 2.6x1, on RasMol version 2.6.4, and RasMol 2.5-ucb and
2.6-ucb.
Please read the file NOTICE for important notices which apply to this
package and for license terms (GPL or RASLIC).
----------------------------------------------------------------------
This documentation directory contains the following "gzipped" files:
README.gz Text version of this file
README.html.gz HTML version of this file for WWW/HTTP
manualUS.rtf.gz 8.5x11 RTF copy of User Manual
(bin) manualUS.ps.gz 8.5x11 PostScript version of the RasMol User Manual
(bin) manualUS.pdf.gz 8.5x11 PDF version of the RasMol User Manual
manualA4.rtf.gz A4 RTF copy of User Manual
(bin) manualA4.ps.gz A4 PostScript version of the RasMol User Manual
(bin) manualA4.pdf.gz A4 PDF version of the RasMol User Manual
refcardUS.rtf.gz 8.5x11 RTF copy of Ref. Card
(bin) refcardUS.ps.gz 8.5x11 PostScript version of Quick Reference Card
(bin) refcardUS.pdf.gz 8.5x11 PDF version of Quick Reference Card
refcardA4.rtf.gz A4 RTF copy of Ref. Card
(bin) refcardA4.ps.gz A4 PostScript version of Quick Reference Card
(bin) refcardA4.pdf.gz A4 PDF version of Quick Reference Card
rasmol.0.gz ASCII text formatted version of UNIX 'man' page
rasmol.1.gz Nroff macro version of the UNIX `man' page
(bin) rasmol.hlp RasMol help file (unix, mac, windows)
rasmol.vms.gz RasMol help file (VMS librarian HELP text)
raswin.rtf.gz RTF source of RasMol WinHelp document
(bin) raswin.hpj.gz Parameter file for RasMol WinHelp document
(bin) raswin.hlp.gz RasMol WinHelp file
rasmol.html.gz HTML version of User Manual for WWW/HTTP
Files marked "(bin)" should be transmitted in binary form.
In addition to the files listed above, there is a master rasmol document
file, rasmol.doc.gz, a Makefile and a copy of Roger Sayle's document
preparation program prepdoc.c which are used in creating new versions of
the documentation.
For those who need uncompressed versions and can accept the longer
download times, uncompressed versions are available:
README Text version of this file
manualUS.rtf 8.5x11 RTF copy of User Manual
(bin) manualUS.ps 8.5x11 PostScript version of the RasMol User Manual
(bin) manualUS.pdf 8.5x11 PDF version of the RasMol User Manual
manualA4.rtf A4 RTF copy of User Manual
(bin) manualA4.ps A4 PostScript version of the RasMol User Manual
(bin) manualA4.pdf A4 PDF version of the RasMol User Manual
refcardUS.rtf 8.5x11 RTF copy of Ref. Card
(bin) refcardUS.ps 8.5x11 PostScript version of Quick Reference Card
(bin) refcardUS.pdf 8.5x11 PDF version of Quick Reference Card
refcardA4.rtf A4 RTF copy of Ref. Card
(bin) refcardA4.ps A4 PostScript version of Quick Reference Card
(bin) refcardA4.pdf A4 PDF version of Quick Reference Card
rasmol.0 ASCII text formatted version of UNIX 'man' page
rasmol.1 Nroff macro version of the UNIX `man' page
(bin) rasmol.hlp RasMol help file (unix, mac, windows)
rasmol.vms RasMol help file (VMS librarian HELP text)
raswin.rtf RTF source of RasMol WinHelp document
(bin) raswin.hpj Parameter file for RasMol WinHelp document
(bin) raswin.hlp RasMol WinHelp file
rasmol.html HTML version of User Manual for WWW/HTTP
----------------------------------------------------------------------
Updated 26 January 2008.
Herbert J. Bernstein
Bernstein + Sons, 5 Brewster Lane, Bellport, NY 11713-2803, USA
yaya@bernstein-plus-sons.com
|
