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/*
Ray
Copyright (C) 2011, 2012 Sébastien Boisvert
http://DeNovoAssembler.SourceForge.Net/
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, version 3 of the License.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You have received a copy of the GNU General Public License
along with this program (gpl-3.0.txt).
see <http://www.gnu.org/licenses/>
*/
#ifndef _ScaffoldingLink_h
#define _ScaffoldingLink_h
/**
* A scaffolding link is a potentially useful link between two contigs
* \author Sébastien Boisvert
*/
class ScaffoldingLink{
/* the distance between the 2 contigs */
int m_distance;
int m_path1MarkerCoverage;
int m_path2MarkerCoverage;
public:
ScaffoldingLink();
void constructor(int distance,int coverage1,int coverage2);
int getDistance();
int getCoverage1();
int getCoverage2();
};
#endif
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