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// $Id: cptest.cpp 1993 2012-03-13 04:25:36Z glandrum $
//
// Copyright (C) 2003-2006 Greg Landrum and Rational Discovery LLC
//
// @@ All Rights Reserved @@
// This file is part of the RDKit.
// The contents are covered by the terms of the BSD license
// which is included in the file license.txt, found at the root
// of the RDKit source tree.
//
#include <GraphMol/RDKitBase.h>
#include <GraphMol/RDKitQueries.h>
#include <GraphMol/SmilesParse/SmilesParse.h>
#include <iostream>
using namespace std;
using namespace RDKit;
void test1(){
Atom *a1 = new Atom(6);
Atom *a2 = new Atom(*a1);
Atom *a3 = a1->copy();
delete a1;
delete a2;
delete a3;
}
void test2(){
RWMol *mol = new RWMol();
mol->addAtom(new Atom(6));
mol->addAtom(new Atom(6));
mol->addAtom(new Atom(8));
mol->addBond(0,1,Bond::SINGLE);
mol->addBond(1,2,Bond::SINGLE);
mol->setAtomBookmark(mol->getAtomWithIdx(1),1);
mol->setBondBookmark(mol->getBondWithIdx(0),2);
CHECK_INVARIANT(mol->hasAtomBookmark(1),"");
CHECK_INVARIANT(mol->getAtomWithBookmark(1)->getIdx()==1,"");
CHECK_INVARIANT(mol->hasBondBookmark(2),"");
CHECK_INVARIANT(mol->getBondWithBookmark(2)->getIdx()==0,"");
RWMol *mol2 = new RWMol(*mol);
CHECK_INVARIANT(mol2->hasAtomBookmark(1),"");
CHECK_INVARIANT(mol2->getAtomWithBookmark(1)->getIdx()==1,"");
CHECK_INVARIANT(mol2->hasBondBookmark(2),"");
CHECK_INVARIANT(mol2->getBondWithBookmark(2)->getIdx()==0,"");
}
void testQueryCopying()
{
BOOST_LOG(rdInfoLog) << "-----------------------\n Testing behavior of copied queries" << std::endl;
{
std::string smi="[$([O,S;H1;v2]-[!$(*=[O,N,P,S])]),$([O,S;H0;v2]),$([O,S;-]),$([N;v3;!$(N-*=!@[O,N,P,S])]),$([nH0,o,s;+0])]";
ROMol *m=static_cast<ROMol *>(SmartsToMol(smi));
TEST_ASSERT(m);
std::cerr<<"\n\n\nCOPY"<<std::endl;
ROMol *m2 = new ROMol(*m,true);
delete m;
delete m2;
}
BOOST_LOG(rdInfoLog) << "Finished" << std::endl;
}
// -------------------------------------------------------------------
int main()
{
#if 0
test1();
test2();
#endif
testQueryCopying();
return 0;
}
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