1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87
|
add_custom_target(inchi_support ALL)
if(RDK_BUILD_INCHI_SUPPORT)
# search system InChI
find_package(Inchi)
# check whether we have custom InChI source
if(EXISTS ${CMAKE_CURRENT_SOURCE_DIR}/src/ichican2.c)
message(STATUS "Found InChI software locally")
if(INCHI_FOUND)
message(WARNING "** Local InChI software takes precedence when both system InChI and local InChI are found")
endif(INCHI_FOUND)
rdkit_library(Inchi src/ichican2.c src/ichicano.c
src/ichicans.c src/ichiisot.c
src/ichilnct.c src/ichimak2.c
src/ichimake.c src/ichimap1.c
src/ichimap2.c src/ichimap4.c
src/ichinorm.c src/ichiparm.c
src/ichiprt1.c src/ichiprt2.c
src/ichiprt3.c src/ichiqueu.c
src/ichiring.c src/ichisort.c
src/ichister.c src/ichitaut.c
src/ichi_bns.c src/inchi_dll.c
src/ichiread.c src/ichirvr1.c
src/ichirvr2.c src/ichirvr3.c
src/ichirvr4.c src/ichirvr5.c
src/ichirvr6.c src/ichirvr7.c
src/inchi_dll_main.c src/runichi.c
src/inchi_dll_a.c src/inchi_dll_a2.c
src/ikey_dll.c src/ikey_base26.c
src/ichi_io.c
src/sha2.c src/strutil.c
src/util.c SHARED)
install(TARGETS Inchi DESTINATION ${RDKit_LibDir})
set(INCHI_LIBRARIES Inchi)
include_directories(${CMAKE_CURRENT_SOURCE_DIR}/src)
else(EXISTS ${CMAKE_CURRENT_SOURCE_DIR}/src/ichican2.c)
if (INCHI_FOUND)
include_directories(${INCHI_INCLUDE_DIR})
else (INCHI_FOUND)
# system InChI is missing
message(WARNING "** NO INCHI SOFTWARE FOUND\n"
"InChI support will be turned off. If you want to add InChI support, please follow the instructions inside $RDBASE/External/INCHI-API/README to download a copy of InChI software and then rerun cmake.")
set(RDK_BUILD_INCHI_SUPPORT OFF)
endif(INCHI_FOUND)
endif(EXISTS ${CMAKE_CURRENT_SOURCE_DIR}/src/ichican2.c)
endif(RDK_BUILD_INCHI_SUPPORT)
# check whether InChI support is ON after the search
if(RDK_BUILD_INCHI_SUPPORT)
rdkit_library(RDInchiLib inchi.cpp SHARED LINK_LIBRARIES ${INCHI_LIBRARIES}
GraphMol RDGeneral Depictor SubstructMatch SmilesParse
${Boost_THREAD_LIBRARY} ${CMAKE_THREAD_LIBS_INIT})
rdkit_headers(inchi.h DEST GraphMol)
if(RDK_BUILD_PYTHON_WRAPPERS)
add_subdirectory(Wrap)
endif(RDK_BUILD_PYTHON_WRAPPERS)
add_definitions(-DBUILD_INCHI_SUPPORT)
rdkit_test(testInchi test.cpp
LINK_LIBRARIES
${INCHI_LIBRARIES}
RDInchiLib ${INCHI_LIBRARIES}
FileParsers SmilesParse Descriptors Depictor SubstructMatch GraphMol
RDGeneral DataStructs RDGeneral RDGeometryLib
${Boost_THREAD_LIBRARY} ${CMAKE_THREAD_LIBS_INIT})
endif(RDK_BUILD_INCHI_SUPPORT)
if(RDK_BUILD_PYTHON_WRAPPERS)
# we need an inchi.py... copy in the appropriate one
if(RDK_BUILD_INCHI_SUPPORT)
add_custom_command(TARGET inchi_support
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/python/inchi.py
${CMAKE_SOURCE_DIR}/rdkit/Chem/inchi.py)
else(RDK_BUILD_INCHI_SUPPORT)
add_custom_command(TARGET inchi_support
COMMAND ${CMAKE_COMMAND} -E copy ${CMAKE_CURRENT_SOURCE_DIR}/python/noinchi.py
${CMAKE_SOURCE_DIR}/rdkit/Chem/inchi.py)
endif(RDK_BUILD_INCHI_SUPPORT)
get_directory_property(extra_clean_files ADDITIONAL_MAKE_CLEAN_FILES)
set_directory_properties(PROPERTIES ADDITIONAL_MAKE_CLEAN_FILES
"${extra_clean_files};${CMAKE_SOURCE_DIR}/rdkit/Chem/inchi.py")
endif(RDK_BUILD_PYTHON_WRAPPERS)
|