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/*
* $Id$
*
* Copyright (c) 2010, Novartis Institutes for BioMedical Research Inc.
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are
* met:
*
* * Redistributions of source code must retain the above copyright
* notice, this list of conditions and the following disclaimer.
* * Redistributions in binary form must reproduce the above
* copyright notice, this list of conditions and the following
* disclaimer in the documentation and/or other materials provided
* with the distribution.
* * Neither the name of Novartis Institutes for BioMedical Research Inc.
* nor the names of its contributors may be used to endorse or promote
* products derived from this software without specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
* "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
* LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
* A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
* OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
* SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
* LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
* DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
* THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
* (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
* OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
%typemap(javaimports) RDKit::SmilesWriter "
/**
The SmilesWriter is for writing molecules and properties to delimited text files. */"
%javamethodmodifiers RDKit::SmilesWriter::SmilesWriter ( std::string fileName, std::string delimiter = ' ', std::string nameHeader = 'Name', bool includeHeader = true, bool isomericSmiles = false, bool kekuleSmiles = false ) "
/**
<p>
<p>
@param
fileName : filename to write to ('-' to write to stdout)
delimiter : delimiter to use in the text file
nameHeader : used to label the name column in the output. If this is provided as the empty string, no names will be written.
includeHeader : toggles inclusion of a header line in the output
isomericSmiles : toggles generation of isomeric SMILES
kekuleSmiles : toggles the generation of kekule SMILES
*/
public";
%javamethodmodifiers RDKit::SmilesWriter::SmilesWriter ( std::ostream * outStream, std::string delimiter = ' ', std::string nameHeader = 'Name', bool includeHeader = true, bool takeOwnership = false, bool isomericSmiles = false, bool kekuleSmiles = false ) "
/**
<p>
This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
<p>
*/
public";
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