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/*
* $Id: GraphMolTest.java 131 2011-01-20 22:01:29Z ebakke $
*
* Copyright (c) 2010, Novartis Institutes for BioMedical Research Inc.
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are
* met:
*
* * Redistributions of source code must retain the above copyright
* notice, this list of conditions and the following disclaimer.
* * Redistributions in binary form must reproduce the above
* copyright notice, this list of conditions and the following
* disclaimer in the documentation and/or other materials provided
* with the distribution.
* * Neither the name of Novartis Institutes for BioMedical Research Inc.
* nor the names of its contributors may be used to endorse or promote
* products derived from this software without specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
* "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
* LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
* A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
* OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
* SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
* LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
* DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
* THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
* (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
* OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package org.RDKit;
import static org.junit.Assert.*;
import java.io.File;
import org.junit.*;
/**
* Super class for all JUnit tests for GraphMol wrappers.
*/
public class GraphMolTest {
public static final double defaultDoubleTol = 1e-5;
public static final double defaultPointTol = 1e-4;
@BeforeClass
public static void initialize() throws Exception {
System.loadLibrary("GraphMolWrap");
}
@AfterClass
public static void cleanup() {
Runtime.getRuntime().gc();
Runtime.getRuntime().runFinalization();
}
public static File getRdBase () {
String rdpath = System.getenv("RDBASE");
assertNotNull( rdpath );
File base = new File(rdpath);
return base;
}
public static void assertPointEquals(Point3D pt1, Point3D pt2, double tol) {
assertEquals(pt1.getX(),pt2.getX(),tol);
assertEquals(pt1.getY(),pt2.getY(),tol);
assertEquals(pt1.getZ(),pt2.getZ(),tol);
}
public static void assertPointEquals(Point3D pt1, Point3D pt2) {
assertPointEquals(pt1, pt2, defaultPointTol);
}
}
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