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<title>References</title>
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<h1>References<br>
</h1>
<ol>
<li><a name="Blaney1994"></a>Blaney, J. M.; Dixon, J. S. "Distance
Geometry in Molecular Modeling". <span style="font-style: italic;">Reviews
in Computation Chemistry</span>; VCH: New York, 1994.</li>
<li><a name="Crippen1981"></a>Crippen, G. M. <span
style="font-style: italic;">Distance Geometry and Conformational
Calculations</span>; Wiley: New York, 1981.</li>
<li><a name="Rappe1992"></a>Rappé, A. K.; Casewit, C. J.;
Colwell, K. S.; Goddard III, W. A.; Skiff, W. M. "UFF, a full periodic
table force field for molecular mechanics and molecular dynamics
simulations". <span style="font-style: italic;">J Am Chem Soc</span>
1992, <span style="font-weight: bold;">114</span>, 10024-10035.</li>
<li><a name="Casewit1992"></a>Casewit, C. J.; Colwell, K. S.;
Rappé, A. K. "Application of a universal force field to organic
molecules". <span style="font-style: italic;">J Am Chem Soc</span>
1992, <span style="font-weight: bold;">114</span>, 10035-10046.</li>
<li><a name="Heisterberg1990"></a>Heisterberg, D. J. "QTRFIT: a
routine for quaternion alignment of molecules"; 1990, Ohio
Supercomputer Center: <a
href="http://www.ccl.net/cca/software/SOURCES/C/quaternion-mol-fit/index.shtml">http://www.ccl.net/cca/software/SOURCES/C/quaternion-mol-fit/index.shtml</a>.<br>
</li>
</ol>
<br><hr>
<h2>Additional Notes</h2>
This software includes functionality from the Python Imaging Library (PIL), available at URL:
<a href="http://www.pythonware.com/products/pil/index.htm" target="_Top">http://www.pythonware.com/products/pil/index.htm</a>
<pre>
The Python Imaging Library (PIL) is
Copyright 1997-2005 by Secret Labs AB
Copyright 1995-2005 by Fredrik Lundh
By obtaining, using, and/or copying this software and/or its
associated documentation, you agree that you have read, understood,
and will comply with the following terms and conditions:
Permission to use, copy, modify, and distribute this software and its
associated documentation for any purpose and without fee is hereby
granted, provided that the above copyright notice appears in all
copies, and that both that copyright notice and this permission notice
appear in supporting documentation, and that the name of Secret Labs
AB or the author not be used in advertising or publicity pertaining to
distribution of the software without specific, written prior
permission.
SECRET LABS AB AND THE AUTHOR DISCLAIMS ALL WARRANTIES WITH REGARD TO
THIS SOFTWARE, INCLUDING ALL IMPLIED WARRANTIES OF MERCHANTABILITY AND
FITNESS. IN NO EVENT SHALL SECRET LABS AB OR THE AUTHOR BE LIABLE FOR
ANY SPECIAL, INDIRECT OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES
WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN
ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT
OF OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.
</pre>
<br><hr>
This software includes functionality from the python win32 extensions, available at URL:
<a href="http://sourceforge.net/projects/pywin32/" target="_Top">https://sourceforge.net/projects/pywin32/</a>
<pre>
Unless stated in the specfic source file, this work is
Copyright (c) 1994-2001, Mark Hammond
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions
are met:
Redistributions of source code must retain the above copyright notice,
this list of conditions and the following disclaimer.
Redistributions in binary form must reproduce the above copyright
notice, this list of conditions and the following disclaimer in
the documentation and/or other materials provided with the distribution.
Neither name of Mark Hammond nor the name of contributors may be used
to endorse or promote products derived from this software without
specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ``AS
IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE REGENTS OR
CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
</pre>
<br><hr>
This software includes functionality from the python numeric extensions, available at URL:
<a href="http://sourceforge.net/project/showfiles.php?group_id=1369&package_id=1351" target="_Top">http://sourceforge.net/project/showfiles.php?group_id=1369&package_id=1351</a>
<pre>
Copyright (c) 1999, 2000, 2001. The Regents of the University of California. All rights reserved.
Permission to use, copy, modify, and distribute this software for any
purpose without fee is hereby granted, provided that this entire
notice is included in all copies of any software which is or includes
a copy or modification of this software and in all copies of the
supporting documentation for such software.
This work was produced at the University of California, Lawrence
Livermore National Laboratory under contract no. W-7405-ENG-48 between
the U.S. Department of Energy and The Regents of the University of
California for the operation of UC LLNL.
This software was prepared as an account of work sponsored by an
agency of the United States Government. Neither the United States
Government nor the University of California nor any of their
employees, makes any warranty, express or implied, or assumes any
liability or responsibility for the accuracy, completeness, or
usefulness of any information, apparatus, product, or process
disclosed, or represents that its use would not infringe
privately-owned rights. Reference herein to any specific commercial
products, process, or service by trade name, trademark, manufacturer,
or otherwise, does not necessarily constitute or imply its
endorsement, recommendation, or favoring by the United States
Government or the University of California. The views and opinions of
authors expressed herein do not necessarily state or reflect those of
the United States Government or the University of California, and
shall not be used for advertising or product endorsement purposes.
</pre>
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