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//
// file RDKitSVSettings.cc
// David Cosgrove
// AstraZeneca
// 4th July 2014
//
#include "RDKitSVSettings.H"
#include <boost/program_options/cmdline.hpp>
#include <boost/program_options/options_description.hpp>
#include <boost/program_options/parsers.hpp>
#include <boost/program_options/variables_map.hpp>
#include <iostream>
using namespace std;
namespace po = boost::program_options;
// *****************************************************************************
RDKitSVSettings::RDKitSVSettings( int argc , char **argv ) {
po::options_description desc( "Allowed Options" );
build_program_options( desc );
po::variables_map vm;
po::store( po::parse_command_line( argc , argv , desc ) , vm );
po::notify( vm );
if( vm.count( "help" ) ) {
cout << desc << endl;
exit( 1 );
}
ostringstream oss;
oss << desc;
usage_text_ = oss.str();
}
// *****************************************************************************
void RDKitSVSettings::build_program_options( po::options_description &desc ) {
desc.add_options()
( "help" , "Produce this help text." )
( "molecule-file,M" , po::value<vector<string> >( &mol_files_ ) ,
"Name of file containing molecules." )
( "smarts-file,S" , po::value<string>( &smarts_file_ ) ,
"Name of file containing SMARTS strings." );
}
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