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//
// file RDKitSVSettings.cc
// David Cosgrove
// AstraZeneca
// 4th July 2014
//
#include "RDKitSVSettings.H"
#include <boost/program_options/cmdline.hpp>
#include <boost/program_options/options_description.hpp>
#include <boost/program_options/parsers.hpp>
#include <boost/program_options/variables_map.hpp>
#include <iostream>
using namespace std;
namespace po = boost::program_options;
// *****************************************************************************
RDKitSVSettings::RDKitSVSettings(int argc, char **argv) {
po::options_description desc("Allowed Options");
build_program_options(desc);
po::variables_map vm;
po::store(po::parse_command_line(argc, argv, desc), vm);
po::notify(vm);
if (vm.count("help")) {
cout << desc << endl;
exit(1);
}
ostringstream oss;
oss << desc;
usage_text_ = oss.str();
}
// *****************************************************************************
void RDKitSVSettings::build_program_options(po::options_description &desc) {
desc.add_options()("help", "Produce this help text.")(
"molecule-file,M", po::value<vector<string>>(&mol_files_),
"Name of file containing molecules.")(
"smarts-file,S", po::value<string>(&smarts_file_),
"Name of file containing SMARTS strings.");
}
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