1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88
|
//
// Copyright (C) 2015-2021 Greg Landrum and other RDKit contributors
//
// @@ All Rights Reserved @@
// This file is part of the RDKit.
// The contents are covered by the terms of the BSD license
// which is included in the file license.txt, found at the root
// of the RDKit source tree.
//
// derived from Dave Cosgrove's MolDraw2D
//
// This is a concrete class derived from MolDraw2D that uses RDKit to draw a
// molecule into an SVG file
#include <RDGeneral/export.h>
#ifndef MOLDRAW2DSVG_H
#define MOLDRAW2DSVG_H
#include <iostream>
#include <sstream>
#include <GraphMol/MolDraw2D/MolDraw2D.h>
// ****************************************************************************
namespace RDKit {
class RDKIT_MOLDRAW2D_EXPORT MolDraw2DSVG : public MolDraw2D {
public:
// initialize to use a particular ostream
MolDraw2DSVG(int width, int height, std::ostream &os, int panelWidth = -1,
int panelHeight = -1, bool noFreetype = false);
// initialize to use the internal stringstream
MolDraw2DSVG(int width, int height, int panelWidth = -1, int panelHeight = -1,
bool noFreetype = false);
MolDraw2DSVG(const MolDraw2DSVG &) = delete;
MolDraw2DSVG(MolDraw2DSVG &&) = delete;
MolDraw2DSVG &operator=(const MolDraw2DSVG &) = delete;
MolDraw2DSVG &operator=(MolDraw2DSVG &&) = delete;
void setColour(const DrawColour &col) override;
// not sure if this goes here or if we should do a dtor since initDrawing() is
// called in the ctor,
// but we'll start here
void finishDrawing();
void drawLine(const Point2D &cds1, const Point2D &cds2,
bool rawCoords = false) override;
void drawPolygon(const std::vector<Point2D> &cds,
bool rawCoords = false) override;
void drawEllipse(const Point2D &cds1, const Point2D &cds2,
bool rawCoords = false) override;
void clearDrawing() override;
void drawWavyLine(const Point2D &cds1, const Point2D &cds2,
const DrawColour &col1, const DrawColour &col2,
unsigned int nSegments = 16, double vertOffset = 0.05,
bool rawCoords = false) override;
// this only makes sense if the object was initialized without a stream
std::string getDrawingText() const { return d_ss.str(); }
// adds additional tags to the atoms and bonds in the SVG. This should be
// invoked *after* the molecule has been drawn
using MolDraw2D::tagAtoms; // Avoid overload warning.
void tagAtoms(const ROMol &mol) override { tagAtoms(mol, 0.2); }
void tagAtoms(const ROMol &mol, double radius,
const std::map<std::string, std::string> &events = {});
// adds metadata describing the molecule to the SVG. This allows
// molecules to be re-built from SVG with MolFromSVG
void addMoleculeMetadata(const ROMol &mol, int confId = -1) const;
void addMoleculeMetadata(const std::vector<ROMol *> &mols,
const std::vector<int> confIds = {});
private:
std::ostream &d_os;
std::stringstream d_ss;
void initDrawing() override;
void initTextDrawer(bool noFreetype) override;
void outputClasses();
};
} // namespace RDKit
#endif // MOLDRAW2DSVG_H
|