File: disable_riscv64_timeout_tests.patch

package info (click to toggle)
rdkit 202503.1-5
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 220,160 kB
  • sloc: cpp: 399,240; python: 77,453; ansic: 25,517; java: 8,173; javascript: 4,005; sql: 2,389; yacc: 1,565; lex: 1,263; cs: 1,081; makefile: 580; xml: 229; fortran: 183; sh: 105
file content (41 lines) | stat: -rw-r--r-- 2,241 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
Index: rdkit/Code/GraphMol/SynthonSpaceSearch/CMakeLists.txt
===================================================================
--- rdkit.orig/Code/GraphMol/SynthonSpaceSearch/CMakeLists.txt
+++ rdkit/Code/GraphMol/SynthonSpaceSearch/CMakeLists.txt
@@ -13,8 +13,9 @@ rdkit_headers(SynthonSpace.h SynthonSet.
 
 rdkit_catch_test(testSynthonSpaceSubstructureSearch substructure_search_catch_tests.cpp
         LINK_LIBRARIES SubstructMatch SubstructLibrary SynthonSpaceSearch)
-rdkit_catch_test(testSynthonSpaceFingerprintSearch fingerprint_search_catch_tests.cpp
-        LINK_LIBRARIES SubstructMatch SubstructLibrary SynthonSpaceSearch)
+# Disabled by Debian due to timeouts on riscv64
+# rdkit_catch_test(testSynthonSpaceFingerprintSearch fingerprint_search_catch_tests.cpp
+#        LINK_LIBRARIES SubstructMatch SubstructLibrary SynthonSpaceSearch)
 rdkit_catch_test(testSynthonSpaceRascalSearch rascal_search_catch_tests.cpp
         LINK_LIBRARIES SubstructMatch SubstructLibrary SynthonSpaceSearch)
 
Index: rdkit/Code/GraphMol/SynthonSpaceSearch/Wrap/CMakeLists.txt
===================================================================
--- rdkit.orig/Code/GraphMol/SynthonSpaceSearch/Wrap/CMakeLists.txt
+++ rdkit/Code/GraphMol/SynthonSpaceSearch/Wrap/CMakeLists.txt
@@ -5,4 +5,5 @@ rdkit_python_extension(rdSynthonSpaceSea
         DEST Chem
         LINK_LIBRARIES SynthonSpaceSearch)
 
-add_pytest(pySynthonSpaceSearch ${CMAKE_CURRENT_SOURCE_DIR}/testSynthonSpaceSearch.py)
+# Disabled by Debian due to timeouts on riscv64
+# add_pytest(pySynthonSpaceSearch ${CMAKE_CURRENT_SOURCE_DIR}/testSynthonSpaceSearch.py)
--- ./Code/GraphMol/CMakeLists.txt.orig	2025-04-07 15:07:37.289144421 +0200
+++ ./Code/GraphMol/CMakeLists.txt	2025-04-07 15:09:08.639740393 +0200
@@ -128,8 +128,9 @@
 add_subdirectory(MolInteractionFields)
 
 
-rdkit_test(graphmolTest1 test1.cpp LINK_LIBRARIES FileParsers SmilesParse GraphMol
-        SubstructMatch ForceFieldHelpers ForceField)
+# Disabled by Debian due to timeouts on riscv64
+# rdkit_test(graphmolTest1 test1.cpp LINK_LIBRARIES FileParsers SmilesParse GraphMol
+#        SubstructMatch ForceFieldHelpers ForceField)
 
 rdkit_test(graphmolcpTest cptest.cpp LINK_LIBRARIES SmilesParse GraphMol)