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// Format: Name\tSmarts\tLabel\tRemovalReaction (optional)
//
// NOTES:
// 1) be sure to make the distinguishing feature of the functional group
// the first atom in the pattern
// 2) the RemovalReaction (if present) is used to remove the functional
// group from the molecule. This is necessary for cases like boronic
// ethers where the full functional group cannot be specified in SMARTS.
//
AcidChloride C(=O)Cl Acid Chloride
AcidChloride.Aromatic [$(C-!@[a])](=O)(Cl) Aromatic
AcidChloride.Aliphatic [$(C-!@[A;!Cl])](=O)(Cl) Aliphatic
CarboxylicAcid C(=O)[O;H,-] Carboxylic acid
// ignore this
CarboxylicAcid.Aromatic [$(C-!@[a])](=O)([O;H,-]) Aromatic
CarboxylicAcid.Aliphatic [$(C-!@[A;!O])](=O)([O;H,-]) Aliphatic // ignore this
CarboxylicAcid.AlphaAmino [$(C-[C;!$(C=[!#6])]-[N;!H0;!$(N-[!#6;!#1]);!$(N-C=[O,N,S])])](=O)([O;H,-]) alpha Amino Acid
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