File: obj3dTest.mol

package info (click to toggle)
rdkit 202503.6-3
  • links: PTS, VCS
  • area: main
  • in suites: sid
  • size: 222,000 kB
  • sloc: cpp: 411,111; python: 78,482; ansic: 26,181; java: 8,285; javascript: 4,404; sql: 2,393; yacc: 1,626; lex: 1,267; cs: 1,090; makefile: 581; xml: 229; fortran: 183; sh: 121
file content (134 lines) | stat: -rw-r--r-- 4,121 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
1 A G meS A G
ACCLDraw03281611052D

  0  0  0     0  0            999 V3000
M  V30 BEGIN CTAB
M  V30 COUNTS 5 4 1 0 1
M  V30 BEGIN ATOM
M  V30 1 Ala 1.5563 -9.2328 0 0 CLASS=AA ATTCHORD=(2 2 Br) SEQID=1
M  V30 2 Gly 2.7137 -9.23 0 0 CLASS=AA ATTCHORD=(4 3 Br 1 Al) SEQID=2
M  V30 3 meS 3.8712 -9.23 0 0 CLASS=AA ATTCHORD=(4 4 Br 2 Al) SEQID=3
M  V30 4 Ala 5.4539 -9.23 0 0 CLASS=AA ATTCHORD=(4 3 Al 5 Br) SEQID=4
M  V30 5 Gly 6.6114 -9.23 0 0 CLASS=AA ATTCHORD=(2 4 Al) SEQID=5
M  V30 END ATOM
M  V30 BEGIN BOND
M  V30 1 1 2 1
M  V30 2 1 3 2
M  V30 3 1 4 3
M  V30 4 1 5 4
M  V30 END BOND
M  V30 BEGIN SGROUP
M  V30 1 DAT 1 ATOMS=(1 1) FIELDNAME="SMMX:sequence position data" -
M  V30 FIELDDISP=" 1.5563 -9.2328 DA ALL 1 "
M  V30 END SGROUP
M  V30 END CTAB
M  V30 BEGIN TEMPLATE
M  V30 TEMPLATE 1 AA/Ala/A/
M  V30 BEGIN CTAB
M  V30 COUNTS 7 6 3 7 1
M  V30 BEGIN ATOM
M  V30 1 O 6.6266 -2.0662 0 0
M  V30 2 H 5.0016 -2.0876 0 0
M  V30 3 N 5.1358 -2.0784 0 0 CFG=3
M  V30 4 C 5.7844 -1.5983 0 0 CFG=2
M  V30 5 C 6.4753 -2.0653 0 0
M  V30 6 O 6.4753 -2.8977 0 0
M  V30 7 C 5.7844 -0.7662 0 0
M  V30 END ATOM
M  V30 BEGIN BOND
M  V30 1 1 3 4
M  V30 2 1 4 5
M  V30 3 2 5 6
M  V30 4 1 4 7 CFG=1
M  V30 5 1 3 2
M  V30 6 1 5 1
M  V30 END BOND
M  V30 BEGIN OBJ3D
M  V30 1 -7 6 "" 0 0 BASIS=(3 6 4 2)
M  V30 2 -5 13 "" 0 0 BASIS=(6 1 2 3 4 5 6)
M  V30 3 -8 7 "" 0 0 BASIS=(2 O3D.1 O3D.2)
M  V30 4 -3 6 "" -2 0 BASIS=(2 O3D.1 O3D.3) PNTDIR=1
M  V30 5 -16 12 "" 1.5 0 BASIS=(1 O3D.4) UNCONNOK=1
M  V30 6 -12 10 "" 75 105 BASIS=(3 O3D.4 O3D.1 7)
M  V30 7 -9 3 "" 4.4 5.7 BASIS=(2 7 O3D.1)
M  V30 END OBJ3D
M  V30 BEGIN SGROUP
M  V30 1 SUP 1 ATOMS=(1 1) XBONDS=(1 6) BRKXYZ=(9 7.02 -2.26 0 7.02 -1.85 0 -
M  V30 0 0 0) CSTATE=(4 6 -0.82 -0.01 0) LABEL=OH CLASS=LGRP
M  V30 2 SUP 2 ATOMS=(1 2) XBONDS=(1 5) BRKXYZ=(9 4.58 -1.87 0 4.6 -2.28 0 -
M  V30 0 0 0) CSTATE=(4 5 0.8 0.02 0) LABEL=H CLASS=LGRP
M  V30 3 SUP 3 ATOMS=(5 3 4 5 6 7) XBONDS=(2 5 6) BRKXYZ=(9 3.95 -3.33 0 3.95 -
M  V30 -0.38 0 0 0 0) CSTATE=(4 5 -0.8 -0.02 0) CSTATE=(4 6 0.82 0.01 -
M  V30 0) LABEL=A CLASS=AA SAP=(3 3 2 Al) SAP=(3 5 1 Br)
M  V30 END SGROUP
M  V30 BEGIN COLLECTION
M  V30 MDLV30/STEABS ATOMS=(1 4)
M  V30 END COLLECTION
M  V30 END CTAB
M  V30 TEMPLATE 2 AA/Gly/G/
M  V30 BEGIN CTAB
M  V30 COUNTS 6 5 3 0 0
M  V30 BEGIN ATOM
M  V30 1 N 3.676 -12.5274 0 0 CFG=3
M  V30 2 C 4.2675 -12.095 0 0
M  V30 3 O 4.8932 -13.2691 0 0
M  V30 4 C 4.8904 -12.5161 0 0
M  V30 5 O 5.1042 -12.5167 0 0
M  V30 6 H 3.4542 -12.5125 0 0
M  V30 END ATOM
M  V30 BEGIN BOND
M  V30 1 1 1 2
M  V30 2 1 2 4
M  V30 3 2 4 3
M  V30 4 1 4 5
M  V30 5 1 1 6
M  V30 END BOND
M  V30 BEGIN SGROUP
M  V30 1 SUP 1 ATOMS=(1 5) XBONDS=(1 4) CSTATE=(4 4 -0.82 -0.01 0) LABEL=OH -
M  V30 CLASS=LGRP
M  V30 2 SUP 2 ATOMS=(4 1 2 3 4) XBONDS=(2 4 5) CSTATE=(4 4 0.82 0.01 0) -
M  V30 CSTATE=(4 5 -0.83 0.01 0) LABEL=G CLASS=AA SAP=(3 4 5 Br) -
M  V30 SAP=(3 1 6 Al)
M  V30 3 SUP 3 ATOMS=(1 6) XBONDS=(1 5) CSTATE=(4 5 0.83 -0.01 0) LABEL=H -
M  V30 CLASS=LGRP
M  V30 END SGROUP
M  V30 END CTAB
M  V30 TEMPLATE 3 AA/meS/meS/ NATREPLACE=AA/S
M  V30 BEGIN CTAB
M  V30 COUNTS 9 8 3 0 1
M  V30 BEGIN ATOM
M  V30 1 C 9.9525 -5.6641 0 0
M  V30 2 O 9.9451 -6.8641 0 0
M  V30 3 N 7.3518 -5.6442 0 0 CFG=3
M  V30 4 C 8.6579 -4.9049 0 0 CFG=1
M  V30 5 C 8.6671 -3.4041 0 0
M  V30 6 O 7.6319 -2.7971 0 0
M  V30 7 C 6.3173 -5.0361 0 0
M  V30 8 O 10.8217 -5.1697 0 0
M  V30 9 H 7.3436 -6.6442 0 0
M  V30 END ATOM
M  V30 BEGIN BOND
M  V30 1 2 2 1
M  V30 2 1 1 4
M  V30 3 1 4 3
M  V30 4 1 4 5 CFG=1
M  V30 5 1 5 6
M  V30 6 1 3 7
M  V30 7 1 1 8
M  V30 8 1 3 9
M  V30 END BOND
M  V30 BEGIN SGROUP
M  V30 1 SUP 1 ATOMS=(7 1 2 3 4 5 6 7) XBONDS=(2 7 8) CSTATE=(4 7 2.17 0.48 -
M  V30 0) CSTATE=(4 8 -1.31 -0.99 0) LABEL=meS CLASS=AA SAP=(3 1 8 Br) -
M  V30 SAP=(3 3 9 Al) NATREPLACE=AA/S
M  V30 2 SUP 2 ATOMS=(1 8) XBONDS=(1 7) CSTATE=(4 7 -2.17 -0.48 0) LABEL=OH -
M  V30 CLASS=LGRP
M  V30 3 SUP 3 ATOMS=(1 9) XBONDS=(1 8) CSTATE=(4 8 1.31 0.99 0) LABEL=H -
M  V30 CLASS=LGRP
M  V30 END SGROUP
M  V30 BEGIN COLLECTION
M  V30 MDLV30/STEABS ATOMS=(1 4)
M  V30 END COLLECTION
M  V30 END CTAB
M  V30 END TEMPLATE
M  END