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Subject: fix resource loading for Java 9
Description: resource loading modification for Java 9
Author: Olivier Sallou
Forwarded: no
Last-Updated: 2017-09-15
--- a/test/edu/msu/cme/rdp/classifier/rrnaclassifier/TrainingInfoTest.java
+++ b/test/edu/msu/cme/rdp/classifier/rrnaclassifier/TrainingInfoTest.java
@@ -55,7 +55,7 @@
/** Test of createLogWordPriorArr method, of class classification.TrainingInfo. */
public void testCreateLogWordPriorArr() throws Exception{
System.out.println("testCreateLogWordPriorArr");
- InputStream dstream = System.class.getResourceAsStream("/test/classifier/testLogWordPrior.txt");
+ InputStream dstream = TrainingInfoTest.class.getResourceAsStream("/test/classifier/testLogWordPrior.txt");
Reader in = new InputStreamReader( dstream );
TrainingInfo train = new TrainingInfo();
@@ -82,7 +82,7 @@
/** Test of createGenusWordProbLis method, of class classification.TrainingInfo. */
public void testCreateGenusWordProbList() throws Exception{
System.out.println("testCreateGenusWordConditionalProbList");
- InputStream dstream = System.class.getResourceAsStream("/test/classifier/testGenus_probList.txt");
+ InputStream dstream = TrainingInfoTest.class.getResourceAsStream("/test/classifier/testGenus_probList.txt");
Reader in = new InputStreamReader( dstream );
TrainingInfo train = new TrainingInfo();
train.createGenusWordProbList(in);
@@ -104,7 +104,7 @@
/** Test of makeProbIndexArr method, of class classification.TrainingInfo. */
public void testCreateProbIndexArr() throws Exception {
System.out.println("testCreateProbIndexArr");
- InputStream dstream = System.class.getResourceAsStream("/test/classifier/testProbIndex.txt");
+ InputStream dstream = TrainingInfoTest.class.getResourceAsStream("/test/classifier/testProbIndex.txt");
Reader in = new InputStreamReader( dstream );
TrainingInfo train = new TrainingInfo();
train.createProbIndexArr(in);
@@ -120,19 +120,19 @@
System.out.println("testCreateClassifier");
TrainingInfo train = new TrainingInfo();
- InputStream dstream = System.class.getResourceAsStream("/test/classifier/testGenus_probList.txt");
+ InputStream dstream = TrainingInfoTest.class.getResourceAsStream("/test/classifier/testGenus_probList.txt");
Reader in = new InputStreamReader( dstream );
train.createGenusWordProbList(in);
- dstream = System.class.getResourceAsStream("/test/classifier/test_bergeyTrainingTree.xml");
+ dstream = TrainingInfoTest.class.getResourceAsStream("/test/classifier/test_bergeyTrainingTree.xml");
in = new InputStreamReader( dstream );
train.createTree(in);
- dstream = System.class.getResourceAsStream("/test/classifier/testProbIndex.txt");
+ dstream = TrainingInfoTest.class.getResourceAsStream("/test/classifier/testProbIndex.txt");
in = new InputStreamReader( dstream );
train.createProbIndexArr(in);
- dstream = System.class.getResourceAsStream("/test/classifier/testLogWordPrior.txt");
+ dstream = TrainingInfoTest.class.getResourceAsStream("/test/classifier/testLogWordPrior.txt");
in = new InputStreamReader( dstream );
train.createLogWordPriorArr(in);
@@ -187,7 +187,7 @@
// end of
- dstream = System.class.getResourceAsStream("/test/classifier/testQuerySeq.fasta");
+ dstream = TrainingInfoTest.class.getResourceAsStream("/test/classifier/testQuerySeq.fasta");
in = new InputStreamReader( dstream );
BufferedReader infile = new BufferedReader(in);
// test the first sequence
--- a/test/edu/msu/cme/rdp/classifier/rrnaclassifier/TreeFileParserTest.java
+++ b/test/edu/msu/cme/rdp/classifier/rrnaclassifier/TreeFileParserTest.java
@@ -39,7 +39,7 @@
public void testParseTreeFile() throws Exception{
System.out.println("testParseTreeFile");
TreeFileParser parser = new TreeFileParser();
- InputStream dstream = System.class.getResourceAsStream("/test/classifier/testTreeFile.xml");
+ InputStream dstream = TreeFileParserTest.class.getResourceAsStream("/test/classifier/testTreeFile.xml");
HierarchyVersion hVersion = null;
Reader in = new InputStreamReader( dstream );
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