File: 20C.cif

package info (click to toggle)
refmac-dictionary 5.41-2
  • links: PTS, VCS
  • area: main
  • in suites: bookworm, bullseye
  • size: 217,852 kB
file content (278 lines) | stat: -rw-r--r-- 12,202 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
20C      20C '2-hydroxy-4-(4-methyl-1,3-dioxo-1,3-' non-polymer        32  22 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_20C
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 20C           O22    O    OC       -0.500      0.000    0.000    0.000
 20C           C20    C    C         0.000     -0.774    0.983    0.004
 20C           O21    O    OC       -0.500     -0.310    2.145    0.008
 20C           C16    C    CR6       0.000     -2.231    0.773    0.003
 20C           C15    C    CR16      0.000     -2.753   -0.525   -0.001
 20C           H15    H    H         0.000     -2.084   -1.377   -0.005
 20C           C14    C    CR16      0.000     -4.104   -0.719   -0.001
 20C           H14    H    H         0.000     -4.503   -1.726   -0.004
 20C           C17    C    CR6       0.000     -3.102    1.873    0.008
 20C           O19    O    OH1       0.000     -2.605    3.136    0.012
 20C           HO19   H    H         0.000     -2.488    3.439   -0.898
 20C           C18    C    CR16      0.000     -4.471    1.665    0.003
 20C           H18    H    H         0.000     -5.149    2.509   -0.001
 20C           C10    C    CR6       0.000     -4.972    0.370    0.003
 20C           N8     N    NR5       0.000     -6.353    0.160    0.004
 20C           C9     C    CR5       0.000     -6.938   -1.052   -0.002
 20C           O11    O    O         0.000     -6.358   -2.118   -0.006
 20C           C6     C    CR56      0.000     -8.404   -0.866   -0.001
 20C           C1     C    CR6       0.000     -9.489   -1.729   -0.006
 20C           C13    C    CH3       0.000     -9.269   -3.220   -0.006
 20C           H13B   H    H         0.000     -8.361   -3.444    0.491
 20C           H13A   H    H         0.000    -10.072   -3.696    0.495
 20C           H13    H    H         0.000     -9.220   -3.570   -1.004
 20C           C7     C    CR5       0.000     -7.272    1.141    0.008
 20C           O12    O    O         0.000     -7.037    2.333    0.012
 20C           C5     C    CR56      0.000     -8.617    0.527    0.005
 20C           C4     C    CR16      0.000     -9.909    1.027    0.007
 20C           H4     H    H         0.000    -10.079    2.096    0.012
 20C           C3     C    CR16      0.000    -10.984    0.152    0.004
 20C           H3     H    H         0.000    -11.995    0.542    0.005
 20C           C2     C    CR16      0.000    -10.776   -1.214   -0.002
 20C           H2     H    H         0.000    -11.624   -1.887   -0.004
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 20C      O22    n/a    C20    START
 20C      C20    O22    C16    .
 20C      O21    C20    .      .
 20C      C16    C20    C17    .
 20C      C15    C16    C14    .
 20C      H15    C15    .      .
 20C      C14    C15    H14    .
 20C      H14    C14    .      .
 20C      C17    C16    C18    .
 20C      O19    C17    HO19   .
 20C      HO19   O19    .      .
 20C      C18    C17    C10    .
 20C      H18    C18    .      .
 20C      C10    C18    N8     .
 20C      N8     C10    C7     .
 20C      C9     N8     C6     .
 20C      O11    C9     .      .
 20C      C6     C9     C1     .
 20C      C1     C6     C13    .
 20C      C13    C1     H13    .
 20C      H13B   C13    .      .
 20C      H13A   C13    .      .
 20C      H13    C13    .      .
 20C      C7     N8     C5     .
 20C      O12    C7     .      .
 20C      C5     C7     C4     .
 20C      C4     C5     C3     .
 20C      H4     C4     .      .
 20C      C3     C4     C2     .
 20C      H3     C3     .      .
 20C      C2     C3     H2     .
 20C      H2     C2     .      END
 20C      C1     C2     .    ADD
 20C      C5     C6     .    ADD
 20C      C10    C14    .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 20C      C1     C6        double      1.490    0.020
 20C      C13    C1        single      1.506    0.020
 20C      C1     C2        single      1.390    0.020
 20C      C2     C3        double      1.390    0.020
 20C      H2     C2        single      1.083    0.020
 20C      C3     C4        single      1.390    0.020
 20C      H3     C3        single      1.083    0.020
 20C      C4     C5        double      1.390    0.020
 20C      H4     C4        single      1.083    0.020
 20C      C5     C7        single      1.490    0.020
 20C      C5     C6        single      1.490    0.020
 20C      C6     C9        single      1.490    0.020
 20C      C7     N8        single      1.337    0.020
 20C      O12    C7        double      1.285    0.020
 20C      N8     C10       single      1.337    0.020
 20C      C9     N8        single      1.337    0.020
 20C      O11    C9        double      1.285    0.020
 20C      C10    C18       double      1.390    0.020
 20C      C10    C14       single      1.390    0.020
 20C      H13    C13       single      1.059    0.020
 20C      H13A   C13       single      1.059    0.020
 20C      H13B   C13       single      1.059    0.020
 20C      C14    C15       double      1.390    0.020
 20C      H14    C14       single      1.083    0.020
 20C      C15    C16       single      1.390    0.020
 20C      H15    C15       single      1.083    0.020
 20C      C16    C20       single      1.500    0.020
 20C      C17    C16       double      1.487    0.020
 20C      O19    C17       single      1.362    0.020
 20C      C18    C17       single      1.390    0.020
 20C      H18    C18       single      1.083    0.020
 20C      HO19   O19       single      0.967    0.020
 20C      O21    C20       deloc       1.250    0.020
 20C      C20    O22       deloc       1.250    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 20C      O22    C20    O21     123.000    3.000
 20C      O22    C20    C16     120.000    3.000
 20C      O21    C20    C16     120.000    3.000
 20C      C20    C16    C15     120.000    3.000
 20C      C20    C16    C17     120.000    3.000
 20C      C15    C16    C17     120.000    3.000
 20C      C16    C15    H15     120.000    3.000
 20C      C16    C15    C14     120.000    3.000
 20C      H15    C15    C14     120.000    3.000
 20C      C15    C14    H14     120.000    3.000
 20C      C15    C14    C10     120.000    3.000
 20C      H14    C14    C10     120.000    3.000
 20C      C16    C17    O19     120.000    3.000
 20C      C16    C17    C18     120.000    3.000
 20C      O19    C17    C18     120.000    3.000
 20C      C17    O19    HO19    109.470    3.000
 20C      C17    C18    H18     120.000    3.000
 20C      C17    C18    C10     120.000    3.000
 20C      H18    C18    C10     120.000    3.000
 20C      C18    C10    N8      132.000    3.000
 20C      C18    C10    C14     120.000    3.000
 20C      N8     C10    C14     132.000    3.000
 20C      C10    N8     C9      108.000    3.000
 20C      C10    N8     C7      108.000    3.000
 20C      C9     N8     C7      108.000    3.000
 20C      N8     C9     O11     108.000    3.000
 20C      N8     C9     C6      108.000    3.000
 20C      O11    C9     C6      108.000    3.000
 20C      C9     C6     C1      132.000    3.000
 20C      C9     C6     C5      108.000    3.000
 20C      C1     C6     C5      120.000    3.000
 20C      C6     C1     C13     120.000    3.000
 20C      C6     C1     C2      120.000    3.000
 20C      C13    C1     C2      120.000    3.000
 20C      C1     C13    H13B    109.470    3.000
 20C      C1     C13    H13A    109.470    3.000
 20C      C1     C13    H13     109.470    3.000
 20C      H13B   C13    H13A    109.470    3.000
 20C      H13B   C13    H13     109.470    3.000
 20C      H13A   C13    H13     109.470    3.000
 20C      N8     C7     O12     108.000    3.000
 20C      N8     C7     C5      108.000    3.000
 20C      O12    C7     C5      108.000    3.000
 20C      C7     C5     C4      126.000    3.000
 20C      C7     C5     C6      108.000    3.000
 20C      C4     C5     C6      120.000    3.000
 20C      C5     C4     H4      120.000    3.000
 20C      C5     C4     C3      120.000    3.000
 20C      H4     C4     C3      120.000    3.000
 20C      C4     C3     H3      120.000    3.000
 20C      C4     C3     C2      120.000    3.000
 20C      H3     C3     C2      120.000    3.000
 20C      C3     C2     H2      120.000    3.000
 20C      C3     C2     C1      120.000    3.000
 20C      H2     C2     C1      120.000    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 20C      var_1    O22    C20    C16    C17     -179.993   20.000   1
 20C      CONST_1  C20    C16    C15    C14      180.000    0.000   0
 20C      CONST_2  C16    C15    C14    C10        0.000    0.000   0
 20C      CONST_3  C20    C16    C17    C18      180.000    0.000   0
 20C      var_2    C16    C17    O19    HO19      90.000   20.000   1
 20C      CONST_4  C16    C17    C18    C10        0.000    0.000   0
 20C      CONST_5  C17    C18    C10    N8       180.000    0.000   0
 20C      CONST_6  C18    C10    C14    C15        0.000    0.000   0
 20C      var_3    C18    C10    N8     C7        -0.207   20.000   1
 20C      CONST_7  C10    N8     C9     C6       180.000    0.000   0
 20C      CONST_8  N8     C9     C6     C1       180.000    0.000   0
 20C      CONST_9  C9     C6     C1     C13        0.000    0.000   0
 20C      CONST_10 C6     C1     C2     C3         0.000    0.000   0
 20C      var_4    C6     C1     C13    H13      -90.348   20.000   1
 20C      CONST_11 C10    N8     C7     C5       180.000    0.000   0
 20C      CONST_12 N8     C7     C5     C4       180.000    0.000   0
 20C      CONST_13 C7     C5     C6     C9         0.000    0.000   0
 20C      CONST_14 C7     C5     C4     C3       180.000    0.000   0
 20C      CONST_15 C5     C4     C3     C2         0.000    0.000   0
 20C      CONST_16 C4     C3     C2     C1         0.000    0.000   0
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 20C      plan-1    C1        0.020
 20C      plan-1    C2        0.020
 20C      plan-1    C6        0.020
 20C      plan-1    C13       0.020
 20C      plan-1    C3        0.020
 20C      plan-1    C4        0.020
 20C      plan-1    H2        0.020
 20C      plan-1    H3        0.020
 20C      plan-1    C5        0.020
 20C      plan-1    H4        0.020
 20C      plan-1    C7        0.020
 20C      plan-1    N8        0.020
 20C      plan-1    C9        0.020
 20C      plan-1    O12       0.020
 20C      plan-1    C10       0.020
 20C      plan-1    O11       0.020
 20C      plan-2    C10       0.020
 20C      plan-2    N8        0.020
 20C      plan-2    C14       0.020
 20C      plan-2    C18       0.020
 20C      plan-2    C15       0.020
 20C      plan-2    C16       0.020
 20C      plan-2    C17       0.020
 20C      plan-2    H14       0.020
 20C      plan-2    H15       0.020
 20C      plan-2    C20       0.020
 20C      plan-2    O19       0.020
 20C      plan-2    H18       0.020
 20C      plan-3    C20       0.020
 20C      plan-3    C16       0.020
 20C      plan-3    O21       0.020
 20C      plan-3    O22       0.020
# ------------------------------------------------------