File: 287.cif

package info (click to toggle)
refmac-dictionary 5.41-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 217,852 kB
file content (468 lines) | stat: -rw-r--r-- 21,565 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
287      287 '4-{[5-(methoxycarbamoyl)-2-methylphe' non-polymer        60  34 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_287
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 287           O33    O    O         0.000      0.000    0.000    0.000
 287           C20    C    C         0.000     -0.589   -1.046   -0.195
 287           N30    N    NH1       0.000      0.103   -2.193   -0.334
 287           H30    H    H         0.000     -0.386   -3.062   -0.495
 287           C25    C    CH1       0.000      1.565   -2.181   -0.251
 287           H25    H    H         0.000      1.950   -1.249   -0.687
 287           C23    C    CH3       0.000      1.994   -2.273    1.215
 287           H233   H    H         0.000      3.052   -2.264    1.276
 287           H232   H    H         0.000      1.604   -1.446    1.751
 287           H231   H    H         0.000      1.625   -3.172    1.637
 287           C12    C    CR6       0.000      2.122   -3.358   -1.011
 287           C5     C    CR16      0.000      3.261   -3.208   -1.779
 287           H5     H    H         0.000      3.754   -2.246   -1.835
 287           C2     C    CR16      0.000      3.772   -4.287   -2.476
 287           H2     H    H         0.000      4.664   -4.170   -3.078
 287           C6     C    CR16      0.000      1.489   -4.585   -0.945
 287           H6     H    H         0.000      0.593   -4.701   -0.348
 287           C3     C    CR16      0.000      2.000   -5.665   -1.641
 287           H3     H    H         0.000      1.505   -6.626   -1.588
 287           C1     C    CR16      0.000      3.143   -5.516   -2.405
 287           H1     H    H         0.000      3.545   -6.363   -2.947
 287           C11    C    CR5       0.000     -2.062   -1.058   -0.279
 287           C14    C    CR5       0.000     -2.916    0.056   -0.152
 287           C22    C    CH3       0.000     -2.500    1.485    0.092
 287           H223   H    H         0.000     -3.213    1.958    0.716
 287           H222   H    H         0.000     -1.552    1.501    0.564
 287           H221   H    H         0.000     -2.443    1.999   -0.832
 287           C16    C    CR56      0.000     -4.203   -0.411   -0.296
 287           N28    N    NR56      0.000     -4.145   -1.776   -0.510
 287           C9     C    CR15      0.000     -2.863   -2.167   -0.494
 287           H9     H    H         0.000     -2.512   -3.183   -0.628
 287           N26    N    NRD6      0.000     -5.351   -2.472   -0.684
 287           C17    C    CR16      0.000     -6.487   -1.834   -0.641
 287           H17    H    H         0.000     -7.406   -2.393   -0.772
 287           N27    N    NRD6      0.000     -6.559   -0.519   -0.441
 287           C18    C    CR6       0.000     -5.473    0.216   -0.268
 287           N29    N    NH1       0.000     -5.577    1.577   -0.062
 287           H29    H    H         0.000     -4.744    2.146   -0.022
 287           C15    C    CR6       0.000     -6.835    2.168    0.090
 287           C13    C    CR6       0.000     -6.997    3.528   -0.145
 287           C21    C    CH3       0.000     -5.815    4.364   -0.565
 287           H213   H    H         0.000     -5.135    3.764   -1.112
 287           H212   H    H         0.000     -6.147    5.165   -1.173
 287           H211   H    H         0.000     -5.333    4.751    0.295
 287           C7     C    CR16      0.000     -8.239    4.116    0.004
 287           H7     H    H         0.000     -8.359    5.176   -0.181
 287           C8     C    CR16      0.000     -7.921    1.396    0.475
 287           H8     H    H         0.000     -7.797    0.336    0.658
 287           C10    C    CR6       0.000     -9.174    1.990    0.625
 287           C4     C    CR16      0.000     -9.327    3.357    0.386
 287           H4     H    H         0.000    -10.298    3.822    0.501
 287           C19    C    C         0.000    -10.337    1.174    1.036
 287           O32    O    O         0.000    -10.202   -0.016    1.243
 287           N31    N    NH1       0.000    -11.547    1.750    1.180
 287           H31    H    H         0.000    -11.659    2.739    1.007
 287           O34    O    O2        0.000    -12.660    0.970    1.574
 287           C24    C    CH3       0.000    -13.878    1.709    1.688
 287           H243   H    H         0.000    -13.762    2.474    2.412
 287           H242   H    H         0.000    -14.117    2.144    0.752
 287           H241   H    H         0.000    -14.660    1.059    1.984
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 287      O33    n/a    C20    START
 287      C20    O33    C11    .
 287      N30    C20    C25    .
 287      H30    N30    .      .
 287      C25    N30    C12    .
 287      H25    C25    .      .
 287      C23    C25    H231   .
 287      H233   C23    .      .
 287      H232   C23    .      .
 287      H231   C23    .      .
 287      C12    C25    C6     .
 287      C5     C12    C2     .
 287      H5     C5     .      .
 287      C2     C5     H2     .
 287      H2     C2     .      .
 287      C6     C12    C3     .
 287      H6     C6     .      .
 287      C3     C6     C1     .
 287      H3     C3     .      .
 287      C1     C3     H1     .
 287      H1     C1     .      .
 287      C11    C20    C14    .
 287      C14    C11    C16    .
 287      C22    C14    H221   .
 287      H223   C22    .      .
 287      H222   C22    .      .
 287      H221   C22    .      .
 287      C16    C14    N28    .
 287      N28    C16    N26    .
 287      C9     N28    H9     .
 287      H9     C9     .      .
 287      N26    N28    C17    .
 287      C17    N26    N27    .
 287      H17    C17    .      .
 287      N27    C17    C18    .
 287      C18    N27    N29    .
 287      N29    C18    C15    .
 287      H29    N29    .      .
 287      C15    N29    C8     .
 287      C13    C15    C7     .
 287      C21    C13    H211   .
 287      H213   C21    .      .
 287      H212   C21    .      .
 287      H211   C21    .      .
 287      C7     C13    H7     .
 287      H7     C7     .      .
 287      C8     C15    C10    .
 287      H8     C8     .      .
 287      C10    C8     C19    .
 287      C4     C10    H4     .
 287      H4     C4     .      .
 287      C19    C10    N31    .
 287      O32    C19    .      .
 287      N31    C19    O34    .
 287      H31    N31    .      .
 287      O34    N31    C24    .
 287      C24    O34    H241   .
 287      H243   C24    .      .
 287      H242   C24    .      .
 287      H241   C24    .      END
 287      C1     C2     .    ADD
 287      C4     C7     .    ADD
 287      C9     C11    .    ADD
 287      C16    C18    .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 287      C24    O34       single      1.426    0.020
 287      O34    N31       single      1.335    0.020
 287      N31    C19       single      1.330    0.020
 287      O32    C19       double      1.220    0.020
 287      C19    C10       single      1.500    0.020
 287      C4     C10       double      1.390    0.020
 287      C4     C7        single      1.390    0.020
 287      C10    C8        single      1.390    0.020
 287      C7     C13       double      1.390    0.020
 287      C8     C15       double      1.390    0.020
 287      C13    C15       single      1.487    0.020
 287      C21    C13       single      1.506    0.020
 287      C15    N29       single      1.350    0.020
 287      N29    C18       single      1.350    0.020
 287      C18    N27       double      1.350    0.020
 287      C16    C18       single      1.490    0.020
 287      N27    C17       single      1.337    0.020
 287      C22    C14       single      1.506    0.020
 287      C16    C14       double      1.490    0.020
 287      N28    C16       single      1.337    0.020
 287      C17    N26       double      1.337    0.020
 287      C14    C11       single      1.490    0.020
 287      N26    N28       single      1.400    0.020
 287      C9     N28       single      1.337    0.020
 287      C9     C11       double      1.387    0.020
 287      C11    C20       single      1.490    0.020
 287      C20    O33       double      1.220    0.020
 287      N30    C20       single      1.330    0.020
 287      C25    N30       single      1.450    0.020
 287      C23    C25       single      1.524    0.020
 287      C12    C25       single      1.480    0.020
 287      C5     C12       double      1.390    0.020
 287      C6     C12       single      1.390    0.020
 287      C2     C5        single      1.390    0.020
 287      C3     C6        double      1.390    0.020
 287      C1     C2        double      1.390    0.020
 287      C1     C3        single      1.390    0.020
 287      H1     C1        single      1.083    0.020
 287      H2     C2        single      1.083    0.020
 287      H3     C3        single      1.083    0.020
 287      H4     C4        single      1.083    0.020
 287      H5     C5        single      1.083    0.020
 287      H6     C6        single      1.083    0.020
 287      H7     C7        single      1.083    0.020
 287      H8     C8        single      1.083    0.020
 287      H9     C9        single      1.083    0.020
 287      H17    C17       single      1.083    0.020
 287      H211   C21       single      1.059    0.020
 287      H212   C21       single      1.059    0.020
 287      H213   C21       single      1.059    0.020
 287      H221   C22       single      1.059    0.020
 287      H222   C22       single      1.059    0.020
 287      H223   C22       single      1.059    0.020
 287      H231   C23       single      1.059    0.020
 287      H232   C23       single      1.059    0.020
 287      H233   C23       single      1.059    0.020
 287      H241   C24       single      1.059    0.020
 287      H242   C24       single      1.059    0.020
 287      H243   C24       single      1.059    0.020
 287      H25    C25       single      1.099    0.020
 287      H29    N29       single      1.010    0.020
 287      H30    N30       single      1.010    0.020
 287      H31    N31       single      1.010    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 287      O33    C20    N30     123.000    3.000
 287      O33    C20    C11     120.500    3.000
 287      N30    C20    C11     120.000    3.000
 287      C20    N30    H30     120.000    3.000
 287      C20    N30    C25     121.500    3.000
 287      H30    N30    C25     118.500    3.000
 287      N30    C25    H25     108.550    3.000
 287      N30    C25    C23     110.000    3.000
 287      N30    C25    C12     109.470    3.000
 287      H25    C25    C23     108.340    3.000
 287      H25    C25    C12     109.470    3.000
 287      C23    C25    C12     109.470    3.000
 287      C25    C23    H233    109.470    3.000
 287      C25    C23    H232    109.470    3.000
 287      C25    C23    H231    109.470    3.000
 287      H233   C23    H232    109.470    3.000
 287      H233   C23    H231    109.470    3.000
 287      H232   C23    H231    109.470    3.000
 287      C25    C12    C5      120.000    3.000
 287      C25    C12    C6      120.000    3.000
 287      C5     C12    C6      120.000    3.000
 287      C12    C5     H5      120.000    3.000
 287      C12    C5     C2      120.000    3.000
 287      H5     C5     C2      120.000    3.000
 287      C5     C2     H2      120.000    3.000
 287      C5     C2     C1      120.000    3.000
 287      H2     C2     C1      120.000    3.000
 287      C12    C6     H6      120.000    3.000
 287      C12    C6     C3      120.000    3.000
 287      H6     C6     C3      120.000    3.000
 287      C6     C3     H3      120.000    3.000
 287      C6     C3     C1      120.000    3.000
 287      H3     C3     C1      120.000    3.000
 287      C3     C1     H1      120.000    3.000
 287      C3     C1     C2      120.000    3.000
 287      H1     C1     C2      120.000    3.000
 287      C20    C11    C14     117.000    3.000
 287      C20    C11    C9      126.000    3.000
 287      C14    C11    C9      108.000    3.000
 287      C11    C14    C22     126.000    3.000
 287      C11    C14    C16     108.000    3.000
 287      C22    C14    C16     108.000    3.000
 287      C14    C22    H223    109.470    3.000
 287      C14    C22    H222    109.470    3.000
 287      C14    C22    H221    109.470    3.000
 287      H223   C22    H222    109.470    3.000
 287      H223   C22    H221    109.470    3.000
 287      H222   C22    H221    109.470    3.000
 287      C14    C16    N28     108.000    3.000
 287      C14    C16    C18     132.000    3.000
 287      N28    C16    C18     120.000    3.000
 287      C16    N28    C9      108.000    3.000
 287      C16    N28    N26     120.000    3.000
 287      C9     N28    N26     120.000    3.000
 287      N28    C9     H9      108.000    3.000
 287      N28    C9     C11     108.000    3.000
 287      H9     C9     C11     126.000    3.000
 287      N28    N26    C17     120.000    3.000
 287      N26    C17    H17     120.000    3.000
 287      N26    C17    N27     120.000    3.000
 287      H17    C17    N27     120.000    3.000
 287      C17    N27    C18     120.000    3.000
 287      N27    C18    N29     120.000    3.000
 287      N27    C18    C16     120.000    3.000
 287      N29    C18    C16     120.000    3.000
 287      C18    N29    H29     120.000    3.000
 287      C18    N29    C15     120.000    3.000
 287      H29    N29    C15     120.000    3.000
 287      N29    C15    C13     120.000    3.000
 287      N29    C15    C8      120.000    3.000
 287      C13    C15    C8      120.000    3.000
 287      C15    C13    C21     120.000    3.000
 287      C15    C13    C7      120.000    3.000
 287      C21    C13    C7      120.000    3.000
 287      C13    C21    H213    109.470    3.000
 287      C13    C21    H212    109.470    3.000
 287      C13    C21    H211    109.470    3.000
 287      H213   C21    H212    109.470    3.000
 287      H213   C21    H211    109.470    3.000
 287      H212   C21    H211    109.470    3.000
 287      C13    C7     H7      120.000    3.000
 287      C13    C7     C4      120.000    3.000
 287      H7     C7     C4      120.000    3.000
 287      C15    C8     H8      120.000    3.000
 287      C15    C8     C10     120.000    3.000
 287      H8     C8     C10     120.000    3.000
 287      C8     C10    C4      120.000    3.000
 287      C8     C10    C19     120.000    3.000
 287      C4     C10    C19     120.000    3.000
 287      C10    C4     H4      120.000    3.000
 287      C10    C4     C7      120.000    3.000
 287      H4     C4     C7      120.000    3.000
 287      C10    C19    O32     120.500    3.000
 287      C10    C19    N31     120.000    3.000
 287      O32    C19    N31     123.000    3.000
 287      C19    N31    H31     120.000    3.000
 287      C19    N31    O34     120.000    3.000
 287      H31    N31    O34     120.000    3.000
 287      N31    O34    C24     120.000    3.000
 287      O34    C24    H243    109.470    3.000
 287      O34    C24    H242    109.470    3.000
 287      O34    C24    H241    109.470    3.000
 287      H243   C24    H242    109.470    3.000
 287      H243   C24    H241    109.470    3.000
 287      H242   C24    H241    109.470    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 287      CONST_1  O33    C20    N30    C25        0.000    0.000   0
 287      var_1    C20    N30    C25    C12     -154.963   20.000   3
 287      var_2    N30    C25    C23    H231      60.002   20.000   3
 287      var_3    N30    C25    C12    C6       -39.674   20.000   1
 287      CONST_2  C25    C12    C5     C2       180.000    0.000   0
 287      CONST_3  C12    C5     C2     C1         0.000    0.000   0
 287      CONST_4  C25    C12    C6     C3       180.000    0.000   0
 287      CONST_5  C12    C6     C3     C1         0.000    0.000   0
 287      CONST_6  C6     C3     C1     C2         0.000    0.000   0
 287      CONST_7  C3     C1     C2     C5         0.000    0.000   0
 287      var_4    O33    C20    C11    C14       -0.030   20.000   1
 287      CONST_8  C20    C11    C14    C16      180.000    0.000   0
 287      var_5    C11    C14    C22    H221      95.643   20.000   1
 287      CONST_9  C11    C14    C16    N28        0.000    0.000   0
 287      CONST_10 C14    C16    C18    N27      180.000    0.000   0
 287      CONST_11 C14    C16    N28    N26      180.000    0.000   0
 287      CONST_12 C16    N28    C9     C11        0.000    0.000   0
 287      CONST_13 N28    C9     C11    C20      180.000    0.000   0
 287      CONST_14 C16    N28    N26    C17        0.000    0.000   0
 287      CONST_15 N28    N26    C17    N27        0.000    0.000   0
 287      CONST_16 N26    C17    N27    C18        0.000    0.000   0
 287      CONST_17 C17    N27    C18    N29      180.000    0.000   0
 287      var_6    N27    C18    N29    C15        5.992   20.000   1
 287      var_7    C18    N29    C15    C8        21.337   20.000   1
 287      CONST_18 N29    C15    C13    C7       180.000    0.000   0
 287      var_8    C15    C13    C21    H211     -90.035   20.000   1
 287      CONST_19 C15    C13    C7     C4         0.000    0.000   0
 287      CONST_20 N29    C15    C8     C10      180.000    0.000   0
 287      CONST_21 C15    C8     C10    C19      180.000    0.000   0
 287      CONST_22 C8     C10    C4     C7         0.000    0.000   0
 287      CONST_23 C10    C4     C7     C13        0.000    0.000   0
 287      var_9    C8     C10    C19    N31     -179.958   20.000   1
 287      CONST_24 C10    C19    N31    O34      180.000    0.000   0
 287      var_10   C19    N31    O34    C24      179.972   20.000   1
 287      var_11   N31    O34    C24    H241     179.954   20.000   1
loop_
_chem_comp_chir.comp_id
_chem_comp_chir.id
_chem_comp_chir.atom_id_centre
_chem_comp_chir.atom_id_1
_chem_comp_chir.atom_id_2
_chem_comp_chir.atom_id_3
_chem_comp_chir.volume_sign
 287      chir_01  C25    C12    C23    N30       positiv
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 287      plan-1    C1        0.020
 287      plan-1    C2        0.020
 287      plan-1    C3        0.020
 287      plan-1    H1        0.020
 287      plan-1    C5        0.020
 287      plan-1    C6        0.020
 287      plan-1    C12       0.020
 287      plan-1    H2        0.020
 287      plan-1    H3        0.020
 287      plan-1    H5        0.020
 287      plan-1    H6        0.020
 287      plan-1    C25       0.020
 287      plan-2    C4        0.020
 287      plan-2    C7        0.020
 287      plan-2    C10       0.020
 287      plan-2    H4        0.020
 287      plan-2    C8        0.020
 287      plan-2    C13       0.020
 287      plan-2    C15       0.020
 287      plan-2    H7        0.020
 287      plan-2    H8        0.020
 287      plan-2    C19       0.020
 287      plan-2    C21       0.020
 287      plan-2    N29       0.020
 287      plan-2    H29       0.020
 287      plan-3    C9        0.020
 287      plan-3    C11       0.020
 287      plan-3    N28       0.020
 287      plan-3    H9        0.020
 287      plan-3    C14       0.020
 287      plan-3    C20       0.020
 287      plan-3    C16       0.020
 287      plan-3    C22       0.020
 287      plan-3    C18       0.020
 287      plan-3    C17       0.020
 287      plan-3    N26       0.020
 287      plan-3    N27       0.020
 287      plan-3    H17       0.020
 287      plan-3    N29       0.020
 287      plan-3    H29       0.020
 287      plan-4    C19       0.020
 287      plan-4    C10       0.020
 287      plan-4    N31       0.020
 287      plan-4    O32       0.020
 287      plan-4    H31       0.020
 287      plan-5    C20       0.020
 287      plan-5    C11       0.020
 287      plan-5    N30       0.020
 287      plan-5    O33       0.020
 287      plan-5    H30       0.020
 287      plan-6    N29       0.020
 287      plan-6    C15       0.020
 287      plan-6    C18       0.020
 287      plan-6    H29       0.020
 287      plan-7    N30       0.020
 287      plan-7    C20       0.020
 287      plan-7    C25       0.020
 287      plan-7    H30       0.020
 287      plan-8    N31       0.020
 287      plan-8    C19       0.020
 287      plan-8    O34       0.020
 287      plan-8    H31       0.020
# ------------------------------------------------------