File: 964.cif

package info (click to toggle)
refmac-dictionary 5.41-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 217,852 kB
file content (425 lines) | stat: -rw-r--r-- 19,558 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
964      964 '"3-(4-{2-[2-(2-BROMO-ACETYLAMINO)-ET' non-polymer        57  31 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_964
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 964           O14    O    O         0.000      0.000    0.000    0.000
 964           C12    C    C         0.000     -1.055   -0.023   -0.597
 964           N11    N    NH1       0.000     -1.103    0.335   -1.895
 964           H11    H    H         0.000     -1.982    0.316   -2.392
 964           C10    C    CH2       0.000      0.120    0.752   -2.585
 964           H101   H    H         0.000      0.846   -0.063   -2.562
 964           H102   H    H         0.000      0.540    1.626   -2.084
 964           C9     C    CH2       0.000     -0.208    1.104   -4.037
 964           H91    H    H         0.000     -0.936    1.918   -4.058
 964           H92    H    H         0.000     -0.629    0.228   -4.536
 964           S8     S    S2        0.000      1.305    1.621   -4.892
 964           S7     S    S2        0.000      2.432   -0.079   -4.680
 964           C6     C    CH2       0.000      1.950   -0.966   -6.187
 964           H61    H    H         0.000      0.872   -1.143   -6.175
 964           H62    H    H         0.000      2.474   -1.922   -6.229
 964           C5     C    CH2       0.000      2.317   -0.126   -7.412
 964           H51    H    H         0.000      3.395    0.051   -7.422
 964           H52    H    H         0.000      1.793    0.831   -7.368
 964           N4     N    NH1       0.000      1.928   -0.843   -8.629
 964           H4     H    H         0.000      1.489   -1.750   -8.563
 964           C2     C    C         0.000      2.154   -0.291   -9.838
 964           O3     O    O         0.000      2.681    0.798   -9.918
 964           C1     C    CH3       0.000      1.754   -1.028  -11.090
 964           H13A   H    H         0.000      2.263   -1.956  -11.133
 964           H12    H    H         0.000      0.709   -1.200  -11.080
 964           H11A   H    H         0.000      2.007   -0.447  -11.939
 964           C13    C    CH1       0.000     -2.313   -0.452    0.113
 964           H13    H    H         0.000     -2.735   -1.333   -0.390
 964           C19    C    CH2       0.000     -1.984   -0.803    1.565
 964           H191   H    H         0.000     -1.564    0.073    2.064
 964           H192   H    H         0.000     -1.256   -1.617    1.587
 964           C18    C    CH2       0.000     -3.261   -1.239    2.286
 964           H182   H    H         0.000     -3.026   -1.491    3.322
 964           H181   H    H         0.000     -3.679   -2.115    1.786
 964           C15    C    CH2       0.000     -3.330    0.689    0.082
 964           H151   H    H         0.000     -3.564    0.939   -0.955
 964           H152   H    H         0.000     -2.910    1.565    0.581
 964           C16    C    CH2       0.000     -4.607    0.253    0.803
 964           H161   H    H         0.000     -5.026   -0.622    0.302
 964           H162   H    H         0.000     -5.334    1.067    0.780
 964           C17    C    CH1       0.000     -4.279   -0.098    2.255
 964           H17    H    H         0.000     -3.857    0.783    2.758
 964           N20    N    NH1       0.000     -5.502   -0.515    2.946
 964           H20    H    H         0.000     -5.773   -1.488    2.949
 964           C21    C    C         0.000     -6.266    0.399    3.576
 964           O23    O    O         0.000     -5.940    1.569    3.572
 964           C22    C    CR6       0.000     -7.504   -0.024    4.274
 964           C24    C    CR6       0.000     -7.442   -0.491    5.596
 964           C29    C    C         0.000     -6.142   -0.558    6.302
 964           O30    O    OC       -0.500     -6.075   -1.067    7.443
 964           O31    O    OC       -0.500     -5.110   -0.107    5.756
 964           N28    N    NRD6      0.000     -8.675    0.033    3.650
 964           C27    C    CR16      0.000     -9.774   -0.344    4.274
 964           H27    H    H         0.000    -10.727   -0.298    3.762
 964           C26    C    CR16      0.000     -9.714   -0.801    5.585
 964           H26    H    H         0.000    -10.621   -1.108    6.091
 964           N25    N    NRD6      0.000     -8.558   -0.862    6.215
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 964      O14    n/a    C12    START
 964      C12    O14    C13    .
 964      N11    C12    C10    .
 964      H11    N11    .      .
 964      C10    N11    C9     .
 964      H101   C10    .      .
 964      H102   C10    .      .
 964      C9     C10    S8     .
 964      H91    C9     .      .
 964      H92    C9     .      .
 964      S8     C9     S7     .
 964      S7     S8     C6     .
 964      C6     S7     C5     .
 964      H61    C6     .      .
 964      H62    C6     .      .
 964      C5     C6     N4     .
 964      H51    C5     .      .
 964      H52    C5     .      .
 964      N4     C5     C2     .
 964      H4     N4     .      .
 964      C2     N4     C1     .
 964      O3     C2     .      .
 964      C1     C2     H11A   .
 964      H13A   C1     .      .
 964      H12    C1     .      .
 964      H11A   C1     .      .
 964      C13    C12    C15    .
 964      H13    C13    .      .
 964      C19    C13    C18    .
 964      H191   C19    .      .
 964      H192   C19    .      .
 964      C18    C19    H181   .
 964      H182   C18    .      .
 964      H181   C18    .      .
 964      C15    C13    C16    .
 964      H151   C15    .      .
 964      H152   C15    .      .
 964      C16    C15    C17    .
 964      H161   C16    .      .
 964      H162   C16    .      .
 964      C17    C16    N20    .
 964      H17    C17    .      .
 964      N20    C17    C21    .
 964      H20    N20    .      .
 964      C21    N20    C22    .
 964      O23    C21    .      .
 964      C22    C21    N28    .
 964      C24    C22    C29    .
 964      C29    C24    O31    .
 964      O30    C29    .      .
 964      O31    C29    .      .
 964      N28    C22    C27    .
 964      C27    N28    C26    .
 964      H27    C27    .      .
 964      C26    C27    N25    .
 964      H26    C26    .      .
 964      N25    C26    .      END
 964      C24    N25    .    ADD
 964      C17    C18    .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 964      O31    C29       deloc       1.250    0.020
 964      C1     C2        single      1.500    0.020
 964      H11A   C1        single      1.059    0.020
 964      H12    C1        single      1.059    0.020
 964      H13A   C1        single      1.059    0.020
 964      C2     N4        single      1.330    0.020
 964      O3     C2        double      1.220    0.020
 964      N4     C5        single      1.450    0.020
 964      H4     N4        single      1.010    0.020
 964      O30    C29       deloc       1.250    0.020
 964      C29    C24       single      1.500    0.020
 964      C24    N25       double      1.350    0.020
 964      C24    C22       single      1.487    0.020
 964      N25    C26       single      1.337    0.020
 964      C26    C27       double      1.390    0.020
 964      H26    C26       single      1.083    0.020
 964      C27    N28       single      1.337    0.020
 964      H27    C27       single      1.083    0.020
 964      N28    C22       double      1.350    0.020
 964      C22    C21       single      1.500    0.020
 964      O23    C21       double      1.220    0.020
 964      C21    N20       single      1.330    0.020
 964      N20    C17       single      1.450    0.020
 964      H20    N20       single      1.010    0.020
 964      C17    C18       single      1.524    0.020
 964      C17    C16       single      1.524    0.020
 964      H17    C17       single      1.099    0.020
 964      C18    C19       single      1.524    0.020
 964      H181   C18       single      1.092    0.020
 964      H182   C18       single      1.092    0.020
 964      C19    C13       single      1.524    0.020
 964      H191   C19       single      1.092    0.020
 964      H192   C19       single      1.092    0.020
 964      C16    C15       single      1.524    0.020
 964      H161   C16       single      1.092    0.020
 964      H162   C16       single      1.092    0.020
 964      C15    C13       single      1.524    0.020
 964      H151   C15       single      1.092    0.020
 964      H152   C15       single      1.092    0.020
 964      C13    C12       single      1.500    0.020
 964      H13    C13       single      1.099    0.020
 964      C12    O14       double      1.220    0.020
 964      N11    C12       single      1.330    0.020
 964      C10    N11       single      1.450    0.020
 964      H11    N11       single      1.010    0.020
 964      C9     C10       single      1.524    0.020
 964      H101   C10       single      1.092    0.020
 964      H102   C10       single      1.092    0.020
 964      S8     C9        single      1.762    0.020
 964      H91    C9        single      1.092    0.020
 964      H92    C9        single      1.092    0.020
 964      C6     S7        single      1.762    0.020
 964      S7     S8        single      2.000    0.020
 964      C5     C6        single      1.524    0.020
 964      H51    C5        single      1.092    0.020
 964      H52    C5        single      1.092    0.020
 964      H61    C6        single      1.092    0.020
 964      H62    C6        single      1.092    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 964      O14    C12    N11     123.000    3.000
 964      O14    C12    C13     120.500    3.000
 964      N11    C12    C13     116.500    3.000
 964      C12    N11    H11     120.000    3.000
 964      C12    N11    C10     121.500    3.000
 964      H11    N11    C10     118.500    3.000
 964      N11    C10    H101    109.470    3.000
 964      N11    C10    H102    109.470    3.000
 964      N11    C10    C9      112.000    3.000
 964      H101   C10    H102    107.900    3.000
 964      H101   C10    C9      109.470    3.000
 964      H102   C10    C9      109.470    3.000
 964      C10    C9     H91     109.470    3.000
 964      C10    C9     H92     109.470    3.000
 964      C10    C9     S8      109.500    3.000
 964      H91    C9     H92     107.900    3.000
 964      H91    C9     S8      109.500    3.000
 964      H92    C9     S8      109.500    3.000
 964      C9     S8     S7       99.983    3.000
 964      S8     S7     C6       99.989    3.000
 964      S7     C6     H61     109.500    3.000
 964      S7     C6     H62     109.500    3.000
 964      S7     C6     C5      109.500    3.000
 964      H61    C6     H62     107.900    3.000
 964      H61    C6     C5      109.470    3.000
 964      H62    C6     C5      109.470    3.000
 964      C6     C5     H51     109.470    3.000
 964      C6     C5     H52     109.470    3.000
 964      C6     C5     N4      112.000    3.000
 964      H51    C5     H52     107.900    3.000
 964      H51    C5     N4      109.470    3.000
 964      H52    C5     N4      109.470    3.000
 964      C5     N4     H4      118.500    3.000
 964      C5     N4     C2      121.500    3.000
 964      H4     N4     C2      120.000    3.000
 964      N4     C2     O3      123.000    3.000
 964      N4     C2     C1      116.500    3.000
 964      O3     C2     C1      123.000    3.000
 964      C2     C1     H13A    109.470    3.000
 964      C2     C1     H12     109.470    3.000
 964      C2     C1     H11A    109.470    3.000
 964      H13A   C1     H12     109.470    3.000
 964      H13A   C1     H11A    109.470    3.000
 964      H12    C1     H11A    109.470    3.000
 964      C12    C13    H13     108.810    3.000
 964      C12    C13    C19     109.470    3.000
 964      C12    C13    C15     109.470    3.000
 964      H13    C13    C19     108.340    3.000
 964      H13    C13    C15     108.340    3.000
 964      C19    C13    C15     109.470    3.000
 964      C13    C19    H191    109.470    3.000
 964      C13    C19    H192    109.470    3.000
 964      C13    C19    C18     111.000    3.000
 964      H191   C19    H192    107.900    3.000
 964      H191   C19    C18     109.470    3.000
 964      H192   C19    C18     109.470    3.000
 964      C19    C18    H182    109.470    3.000
 964      C19    C18    H181    109.470    3.000
 964      C19    C18    C17     111.000    3.000
 964      H182   C18    H181    107.900    3.000
 964      H182   C18    C17     109.470    3.000
 964      H181   C18    C17     109.470    3.000
 964      C13    C15    H151    109.470    3.000
 964      C13    C15    H152    109.470    3.000
 964      C13    C15    C16     111.000    3.000
 964      H151   C15    H152    107.900    3.000
 964      H151   C15    C16     109.470    3.000
 964      H152   C15    C16     109.470    3.000
 964      C15    C16    H161    109.470    3.000
 964      C15    C16    H162    109.470    3.000
 964      C15    C16    C17     111.000    3.000
 964      H161   C16    H162    107.900    3.000
 964      H161   C16    C17     109.470    3.000
 964      H162   C16    C17     109.470    3.000
 964      C16    C17    H17     108.340    3.000
 964      C16    C17    N20     110.000    3.000
 964      C16    C17    C18     109.470    3.000
 964      H17    C17    N20     108.550    3.000
 964      H17    C17    C18     108.340    3.000
 964      N20    C17    C18     110.000    3.000
 964      C17    N20    H20     118.500    3.000
 964      C17    N20    C21     121.500    3.000
 964      H20    N20    C21     120.000    3.000
 964      N20    C21    O23     123.000    3.000
 964      N20    C21    C22     120.000    3.000
 964      O23    C21    C22     120.500    3.000
 964      C21    C22    C24     120.000    3.000
 964      C21    C22    N28     120.000    3.000
 964      C24    C22    N28     120.000    3.000
 964      C22    C24    C29     120.000    3.000
 964      C22    C24    N25     120.000    3.000
 964      C29    C24    N25     120.000    3.000
 964      C24    C29    O30     120.000    3.000
 964      C24    C29    O31     120.000    3.000
 964      O30    C29    O31     123.000    3.000
 964      C22    N28    C27     120.000    3.000
 964      N28    C27    H27     120.000    3.000
 964      N28    C27    C26     120.000    3.000
 964      H27    C27    C26     120.000    3.000
 964      C27    C26    H26     120.000    3.000
 964      C27    C26    N25     120.000    3.000
 964      H26    C26    N25     120.000    3.000
 964      C26    N25    C24     120.000    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 964      CONST_1  O14    C12    N11    C10        0.000    0.000   0
 964      var_1    C12    N11    C10    C9      -179.970   20.000   3
 964      var_2    N11    C10    C9     S8       179.965   20.000   3
 964      var_3    C10    C9     S8     S7        59.970   20.000   1
 964      var_4    C9     S8     S7     C6        90.032   20.000   1
 964      var_5    S8     S7     C6     C5        60.041   20.000   1
 964      var_6    S7     C6     C5     N4      -179.991   20.000   3
 964      var_7    C6     C5     N4     C2       179.951   20.000   3
 964      CONST_2  C5     N4     C2     C1       180.000    0.000   0
 964      var_8    N4     C2     C1     H11A    -179.992   20.000   1
 964      var_9    O14    C12    C13    C15      120.022   20.000   3
 964      var_10   C12    C13    C19    C18      180.000   20.000   3
 964      var_11   C13    C19    C18    C17      -60.000   20.000   3
 964      var_12   C12    C13    C15    C16      180.000   20.000   3
 964      var_13   C13    C15    C16    C17       60.000   20.000   3
 964      var_14   C15    C16    C17    N20      180.000   20.000   3
 964      var_15   C16    C17    C18    C19       60.000   20.000   3
 964      var_16   C16    C17    N20    C21      -89.998   20.000   3
 964      CONST_3  C17    N20    C21    C22      180.000    0.000   0
 964      var_17   N20    C21    C22    N28      -94.407   20.000   1
 964      CONST_4  C21    C22    C24    C29        0.000    0.000   0
 964      CONST_5  C22    C24    N25    C26        0.000    0.000   0
 964      var_18   C22    C24    C29    O31        5.232   20.000   1
 964      CONST_6  C21    C22    N28    C27      180.000    0.000   0
 964      CONST_7  C22    N28    C27    C26        0.000    0.000   0
 964      CONST_8  N28    C27    C26    N25        0.000    0.000   0
 964      CONST_9  C27    C26    N25    C24        0.000    0.000   0
loop_
_chem_comp_chir.comp_id
_chem_comp_chir.id
_chem_comp_chir.atom_id_centre
_chem_comp_chir.atom_id_1
_chem_comp_chir.atom_id_2
_chem_comp_chir.atom_id_3
_chem_comp_chir.volume_sign
 964      chir_01  C17    N20    C18    C16       negativ
 964      chir_02  C13    C19    C15    C12       negativ
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 964      plan-1    C2        0.020
 964      plan-1    C1        0.020
 964      plan-1    N4        0.020
 964      plan-1    O3        0.020
 964      plan-1    H4        0.020
 964      plan-2    N4        0.020
 964      plan-2    C2        0.020
 964      plan-2    C5        0.020
 964      plan-2    H4        0.020
 964      plan-3    C29       0.020
 964      plan-3    O31       0.020
 964      plan-3    O30       0.020
 964      plan-3    C24       0.020
 964      plan-4    C24       0.020
 964      plan-4    C29       0.020
 964      plan-4    N25       0.020
 964      plan-4    C22       0.020
 964      plan-4    C26       0.020
 964      plan-4    C27       0.020
 964      plan-4    N28       0.020
 964      plan-4    H26       0.020
 964      plan-4    H27       0.020
 964      plan-4    C21       0.020
 964      plan-5    C21       0.020
 964      plan-5    C22       0.020
 964      plan-5    O23       0.020
 964      plan-5    N20       0.020
 964      plan-5    H20       0.020
 964      plan-6    N20       0.020
 964      plan-6    C21       0.020
 964      plan-6    C17       0.020
 964      plan-6    H20       0.020
 964      plan-7    C12       0.020
 964      plan-7    C13       0.020
 964      plan-7    O14       0.020
 964      plan-7    N11       0.020
 964      plan-7    H11       0.020
 964      plan-8    N11       0.020
 964      plan-8    C12       0.020
 964      plan-8    C10       0.020
 964      plan-8    H11       0.020
# ------------------------------------------------------