File: CA1.cif

package info (click to toggle)
refmac-dictionary 5.41-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 217,852 kB
file content (157 lines) | stat: -rw-r--r-- 6,175 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
CA1      CA1 'ETHYL PROPIONATE                    ' non-polymer        17   7 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_CA1
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 CA1           OX8    O    O        -0.500      0.000    0.000    0.000
 CA1           CX7    C    C         0.000     -1.161   -0.465    0.002
 CA1           CX6    C    CH2       0.000     -2.347    0.465   -0.001
 CA1           H2     H    H         0.000     -2.951    0.287    0.891
 CA1           H3     H    H         0.000     -2.952    0.281   -0.892
 CA1           CX5    C    CH3       0.000     -1.857    1.915   -0.006
 CA1           HX52   H    H         0.000     -1.269    2.096    0.857
 CA1           HX51   H    H         0.000     -1.270    2.091   -0.872
 CA1           H1     H    H         0.000     -2.689    2.573   -0.008
 CA1           OX9    O    O2       -0.500     -1.339   -1.703    0.005
 CA1           CJ1    C    CH2       0.000     -0.210   -2.691    0.009
 CA1           H4     H    H         0.000      0.393   -2.506    0.900
 CA1           H5     H    H         0.000      0.395   -2.512   -0.882
 CA1           CJ2    C    CH3       0.000     -0.699   -4.140    0.013
 CA1           H8     H    H         0.000     -1.287   -4.321   -0.851
 CA1           H7     H    H         0.000      0.133   -4.797    0.015
 CA1           H6     H    H         0.000     -1.286   -4.316    0.879
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 CA1      OX8    n/a    CX7    START
 CA1      CX7    OX8    OX9    .
 CA1      CX6    CX7    CX5    .
 CA1      H2     CX6    .      .
 CA1      H3     CX6    .      .
 CA1      CX5    CX6    H1     .
 CA1      HX52   CX5    .      .
 CA1      HX51   CX5    .      .
 CA1      H1     CX5    .      .
 CA1      OX9    CX7    CJ1    .
 CA1      CJ1    OX9    CJ2    .
 CA1      H4     CJ1    .      .
 CA1      H5     CJ1    .      .
 CA1      CJ2    CJ1    H6     .
 CA1      H8     CJ2    .      .
 CA1      H7     CJ2    .      .
 CA1      H6     CJ2    .      END
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 CA1      CX5    CX6       single      1.513    0.020
 CA1      H1     CX5       single      1.059    0.020
 CA1      HX51   CX5       single      1.059    0.020
 CA1      HX52   CX5       single      1.059    0.020
 CA1      CX6    CX7       single      1.510    0.020
 CA1      H2     CX6       single      1.092    0.020
 CA1      H3     CX6       single      1.092    0.020
 CA1      CX7    OX8       deloc       1.220    0.020
 CA1      OX9    CX7       deloc       1.454    0.020
 CA1      CJ1    OX9       single      1.426    0.020
 CA1      CJ2    CJ1       single      1.513    0.020
 CA1      H4     CJ1       single      1.092    0.020
 CA1      H5     CJ1       single      1.092    0.020
 CA1      H6     CJ2       single      1.059    0.020
 CA1      H7     CJ2       single      1.059    0.020
 CA1      H8     CJ2       single      1.059    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 CA1      OX8    CX7    CX6     120.500    3.000
 CA1      OX8    CX7    OX9     119.000    3.000
 CA1      CX6    CX7    OX9     120.000    3.000
 CA1      CX7    CX6    H2      109.470    3.000
 CA1      CX7    CX6    H3      109.470    3.000
 CA1      CX7    CX6    CX5     109.500    3.000
 CA1      H2     CX6    H3      107.900    3.000
 CA1      H2     CX6    CX5     109.470    3.000
 CA1      H3     CX6    CX5     109.470    3.000
 CA1      CX6    CX5    HX52    109.470    3.000
 CA1      CX6    CX5    HX51    109.470    3.000
 CA1      CX6    CX5    H1      109.470    3.000
 CA1      HX52   CX5    HX51    109.470    3.000
 CA1      HX52   CX5    H1      109.470    3.000
 CA1      HX51   CX5    H1      109.470    3.000
 CA1      CX7    OX9    CJ1     120.000    3.000
 CA1      OX9    CJ1    H4      109.470    3.000
 CA1      OX9    CJ1    H5      109.470    3.000
 CA1      OX9    CJ1    CJ2     109.470    3.000
 CA1      H4     CJ1    H5      107.900    3.000
 CA1      H4     CJ1    CJ2     109.470    3.000
 CA1      H5     CJ1    CJ2     109.470    3.000
 CA1      CJ1    CJ2    H8      109.470    3.000
 CA1      CJ1    CJ2    H7      109.470    3.000
 CA1      CJ1    CJ2    H6      109.470    3.000
 CA1      H8     CJ2    H7      109.470    3.000
 CA1      H8     CJ2    H6      109.470    3.000
 CA1      H7     CJ2    H6      109.470    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 CA1      var_1    OX8    CX7    CX6    CX5        0.022   20.000   3
 CA1      var_2    CX7    CX6    CX5    H1      -179.985   20.000   3
 CA1      var_3    OX8    CX7    OX9    CJ1        0.053   20.000   1
 CA1      var_4    CX7    OX9    CJ1    CJ2      180.000   20.000   1
 CA1      var_5    OX9    CJ1    CJ2    H6       -60.055   20.000   3
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 CA1      plan-1    CX7       0.020
 CA1      plan-1    CX6       0.000
 CA1      plan-1    OX8       0.000
 CA1      plan-1    OX9       0.000
# ------------------------------------------------------