File: DGS.cif

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global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
DGS      DGS '3,6-ANHYDRO-D-GALACTOSE-2-SULFATE   ' pyranose           25  15 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_DGS
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 DGS           C1     C    CH1       0.000      0.000    0.000    0.000
 DGS           H1     H    H         0.000      0.351    0.489    0.920
 DGS           O1     O    OH1       0.000      1.089   -0.696   -0.608
 DGS           HO1    H    H         0.000      1.789   -0.067   -0.830
 DGS           O5     O    O2        0.000     -0.490    0.992   -0.904
 DGS           C5     C    CH1       0.000     -1.651    1.687   -0.410
 DGS           H5     H    H         0.000     -1.892    2.603   -0.969
 DGS           C4     C    CH1       0.000     -2.802    0.639   -0.395
 DGS           H4     H    H         0.000     -2.814    0.046   -1.320
 DGS           O4     O    OH1       0.000     -4.068    1.257   -0.155
 DGS           HO4    H    H         0.000     -4.322    1.780   -0.928
 DGS           C6     C    CH2       0.000     -1.423    1.920    1.104
 DGS           H61    H    H         0.000     -1.980    2.795    1.446
 DGS           H62    H    H         0.000     -0.361    2.062    1.314
 DGS           O3     O    O2        0.000     -1.896    0.753    1.788
 DGS           C3     C    CH1       0.000     -2.348   -0.216    0.821
 DGS           H3     H    H         0.000     -3.144   -0.867    1.207
 DGS           C2     C    CH1       0.000     -1.106   -0.999    0.350
 DGS           H2     H    H         0.000     -0.762   -1.664    1.154
 DGS           O2     O    O2        0.000     -1.437   -1.772   -0.805
 DGS           S      S    ST        0.000     -0.705   -3.105   -0.887
 DGS           O8     O    OS        0.000     -0.991   -3.641   -2.172
 DGS           O7     O    OH1       0.000     -1.355   -4.039    0.123
 DGS           HO7    H    H         0.000     -1.016   -4.923    0.201
 DGS           O9     O    OS        0.000      0.617   -2.867   -0.421
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 DGS      C1     n/a    O5     START
 DGS      H1     C1     .      .
 DGS      O1     C1     HO1    .
 DGS      HO1    O1     .      .
 DGS      O5     C1     .      END
 DGS      C5     O5     C6     .
 DGS      H5     C5     .      .
 DGS      C4     C5     O4     .
 DGS      H4     C4     .      .
 DGS      O4     C4     HO4    .
 DGS      HO4    O4     .      .
 DGS      C6     C5     O3     .
 DGS      H61    C6     .      .
 DGS      H62    C6     .      .
 DGS      O3     C6     C3     .
 DGS      C3     O3     C2     .
 DGS      H3     C3     .      .
 DGS      C2     C3     O2     .
 DGS      H2     C2     .      .
 DGS      O2     C2     S      .
 DGS      S      O2     O9     .
 DGS      O8     S      .      .
 DGS      O7     S      HO7    .
 DGS      HO7    O7     .      .
 DGS      O9     S      .      .
 DGS      C1     C2     .    ADD
 DGS      C3     C4     .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 DGS      C1     C2        single      1.524    0.020
 DGS      O1     C1        single      1.432    0.020
 DGS      O5     C1        single      1.426    0.020
 DGS      H1     C1        single      1.099    0.020
 DGS      C2     C3        single      1.524    0.020
 DGS      O2     C2        single      1.426    0.020
 DGS      H2     C2        single      1.099    0.020
 DGS      C3     C4        single      1.524    0.020
 DGS      C3     O3        single      1.426    0.020
 DGS      H3     C3        single      1.099    0.020
 DGS      C4     C5        single      1.524    0.020
 DGS      O4     C4        single      1.432    0.020
 DGS      H4     C4        single      1.099    0.020
 DGS      C6     C5        single      1.524    0.020
 DGS      C5     O5        single      1.426    0.020
 DGS      H5     C5        single      1.099    0.020
 DGS      O3     C6        single      1.426    0.020
 DGS      H61    C6        single      1.092    0.020
 DGS      H62    C6        single      1.092    0.020
 DGS      HO1    O1        single      0.967    0.020
 DGS      S      O2        single      1.535    0.020
 DGS      HO4    O4        single      0.967    0.020
 DGS      O7     S         single      1.635    0.020
 DGS      HO7    O7        single      0.967    0.020
 DGS      O8     S         double      1.436    0.020
 DGS      O9     S         double      1.436    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 DGS      H1     C1     O1      109.470    3.000
 DGS      H1     C1     O5      109.470    3.000
 DGS      O1     C1     O5      109.470    3.000
 DGS      H1     C1     C2      108.340    3.000
 DGS      O1     C1     C2      109.470    3.000
 DGS      O5     C1     C2      109.470    3.000
 DGS      C1     O1     HO1     109.470    3.000
 DGS      C1     O5     C5      111.800    3.000
 DGS      O5     C5     H5      109.470    3.000
 DGS      O5     C5     C4      109.470    3.000
 DGS      O5     C5     C6      109.470    3.000
 DGS      H5     C5     C4      108.340    3.000
 DGS      H5     C5     C6      108.340    3.000
 DGS      C4     C5     C6      111.000    3.000
 DGS      C5     C4     H4      108.340    3.000
 DGS      C5     C4     O4      109.470    3.000
 DGS      C5     C4     C3      111.000    3.000
 DGS      H4     C4     O4      109.470    3.000
 DGS      H4     C4     C3      108.340    3.000
 DGS      O4     C4     C3      109.470    3.000
 DGS      C4     O4     HO4     109.470    3.000
 DGS      C5     C6     H61     109.470    3.000
 DGS      C5     C6     H62     109.470    3.000
 DGS      C5     C6     O3      109.470    3.000
 DGS      H61    C6     H62     107.900    3.000
 DGS      H61    C6     O3      109.470    3.000
 DGS      H62    C6     O3      109.470    3.000
 DGS      C6     O3     C3      111.800    3.000
 DGS      O3     C3     H3      109.470    3.000
 DGS      O3     C3     C2      109.470    3.000
 DGS      O3     C3     C4      109.470    3.000
 DGS      H3     C3     C2      108.340    3.000
 DGS      H3     C3     C4      108.340    3.000
 DGS      C2     C3     C4      111.000    3.000
 DGS      C3     C2     H2      108.340    3.000
 DGS      C3     C2     O2      109.470    3.000
 DGS      C3     C2     C1      111.000    3.000
 DGS      H2     C2     O2      109.470    3.000
 DGS      H2     C2     C1      108.340    3.000
 DGS      O2     C2     C1      109.470    3.000
 DGS      C2     O2     S       120.000    3.000
 DGS      O2     S      O8      109.500    3.000
 DGS      O2     S      O7      109.500    3.000
 DGS      O2     S      O9      109.500    3.000
 DGS      O8     S      O7      109.500    3.000
 DGS      O8     S      O9      109.500    3.000
 DGS      O7     S      O9      109.500    3.000
 DGS      S      O7     HO7     120.000    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 DGS      var_1    O5     C1     O1     HO1       59.021   20.000   1
 DGS      var_2    C1     O5     C5     C6        30.000   20.000   1
 DGS      var_3    O5     C5     C4     O4       180.000   20.000   3
 DGS      var_4    C5     C4     O4     HO4       70.012   20.000   1
 DGS      var_5    O5     C5     C6     O3       -86.954   20.000   3
 DGS      var_6    C5     C6     O3     C3         2.510   20.000   1
 DGS      var_7    C6     O3     C3     C2        83.959   20.000   1
 DGS      var_8    O3     C3     C4     C5        30.000   20.000   3
 DGS      var_9    O3     C3     C2     O2       180.000   20.000   3
 DGS      var_10   C3     C2     C1     O5       -60.000   20.000   3
 DGS      var_11   C3     C2     O2     S       -145.815   20.000   1
 DGS      var_12   C2     O2     S      O9       -38.518   20.000   1
 DGS      var_13   O2     S      O7     HO7      179.906   20.000   1
 DGS      var_1    C5     O5     C1     C2        60.000   20.000   1
loop_
_chem_comp_chir.comp_id
_chem_comp_chir.id
_chem_comp_chir.atom_id_centre
_chem_comp_chir.atom_id_1
_chem_comp_chir.atom_id_2
_chem_comp_chir.atom_id_3
_chem_comp_chir.volume_sign
 DGS      chir_01  C1     C2     O1     O5        negativ
 DGS      chir_02  C2     C1     C3     O2        negativ
 DGS      chir_03  C3     C2     C4     O3        positiv
 DGS      chir_04  C4     C3     C5     O4        positiv
 DGS      chir_05  C5     C4     C6     O5        negativ
 DGS      chir_06  S      O2     O7     O8        negativ
# ------------------------------------------------------