File: DI2.cif

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global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
DI2      DI2 'AC-(D)PHE-PRO-BOROLYS-OH            ' non-polymer        64  31 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_DI2
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 DI2           O4     O    O         0.000      0.000    0.000    0.000
 DI2           C14    C    C         0.000     -0.087    1.200    0.147
 DI2           C15    C    CH3       0.000      0.867    2.119   -0.572
 DI2           H153   H    H         0.000      0.322    2.771   -1.205
 DI2           H152   H    H         0.000      1.411    2.689    0.136
 DI2           H151   H    H         0.000      1.540    1.545   -1.154
 DI2           N3     N    NH1       0.000     -1.040    1.713    0.952
 DI2           HN3    H    H         0.000     -1.113    2.712    1.074
 DI2           C13    C    CH1       0.000     -1.967    0.819    1.650
 DI2           H13    H    H         0.000     -2.665    1.415    2.254
 DI2           C12    C    CH2       0.000     -1.178   -0.122    2.562
 DI2           H121   H    H         0.000     -0.485   -0.714    1.960
 DI2           H122   H    H         0.000     -1.869   -0.790    3.080
 DI2           C20    C    CR6       0.000     -0.405    0.687    3.572
 DI2           C19    C    CR16      0.000     -0.979    1.008    4.786
 DI2           H19    H    H         0.000     -1.986    0.678    5.013
 DI2           C18    C    CR16      0.000     -0.270    1.750    5.712
 DI2           H18    H    H         0.000     -0.721    2.003    6.664
 DI2           C17    C    CR16      0.000      1.015    2.170    5.423
 DI2           H17    H    H         0.000      1.571    2.750    6.148
 DI2           C21    C    CR16      0.000      0.882    1.103    3.284
 DI2           H21    H    H         0.000      1.335    0.844    2.335
 DI2           C16    C    CR16      0.000      1.589    1.848    4.207
 DI2           H16    H    H         0.000      2.595    2.180    3.979
 DI2           C11    C    C         0.000     -2.740    0.011    0.640
 DI2           O3     O    O         0.000     -2.236   -0.272   -0.425
 DI2           N2     N    N         0.000     -3.993   -0.399    0.923
 DI2           C10    C    CH2       0.000     -4.724   -0.127    2.174
 DI2           H101   H    H         0.000     -5.232    0.839    2.143
 DI2           H102   H    H         0.000     -4.065   -0.163    3.044
 DI2           C9     C    CH2       0.000     -5.774   -1.262    2.273
 DI2           H91    H    H         0.000     -6.653   -0.986    2.860
 DI2           H92    H    H         0.000     -5.362   -2.198    2.655
 DI2           C8     C    CH2       0.000     -6.179   -1.442    0.787
 DI2           H82    H    H         0.000     -6.930   -0.716    0.466
 DI2           H81    H    H         0.000     -6.535   -2.451    0.568
 DI2           C6     C    CH1       0.000     -4.858   -1.185    0.033
 DI2           H6     H    H         0.000     -4.374   -2.143   -0.206
 DI2           C7     C    C         0.000     -5.132   -0.422   -1.237
 DI2           O2     O    O         0.000     -4.646    0.677   -1.401
 DI2           N      N    NH1       0.000     -5.916   -0.961   -2.191
 DI2           HN     H    H         0.000     -6.321   -1.876   -2.055
 DI2           C      C    CH1       0.000     -6.183   -0.218   -3.426
 DI2           H      H    H         0.000     -5.325    0.427   -3.658
 DI2           B1     B    B         0.000     -7.467    0.665   -3.238
 DI2           O1     O    OH1       0.000     -7.384    2.075   -3.376
 DI2           HO1    H    H         0.000     -6.539    2.456   -3.582
 DI2           O      O    OH1       0.000     -8.712    0.054   -2.930
 DI2           HO     H    H         0.000     -9.471    0.614   -2.822
 DI2           C2     C    CH2       0.000     -6.407   -1.203   -4.575
 DI2           H21A   H    H         0.000     -7.260   -1.844   -4.343
 DI2           H22    H    H         0.000     -5.515   -1.819   -4.704
 DI2           C3     C    CH2       0.000     -6.685   -0.429   -5.864
 DI2           H31    H    H         0.000     -5.832    0.213   -6.093
 DI2           H32    H    H         0.000     -7.577    0.187   -5.733
 DI2           C4     C    CH2       0.000     -6.908   -1.413   -7.013
 DI2           H41    H    H         0.000     -7.761   -2.055   -6.782
 DI2           H42    H    H         0.000     -6.015   -2.029   -7.142
 DI2           C5     C    CH2       0.000     -7.186   -0.639   -8.303
 DI2           H51    H    H         0.000     -6.332    0.003   -8.532
 DI2           H52    H    H         0.000     -8.078   -0.023   -8.171
 DI2           N1     N    NH2       0.000     -7.400   -1.583   -9.406
 DI2           HN12   H    H         0.000     -7.351   -2.581   -9.242
 DI2           HN11   H    H         0.000     -7.599   -1.242  -10.340
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 DI2      O4     n/a    C14    START
 DI2      C14    O4     N3     .
 DI2      C15    C14    H151   .
 DI2      H153   C15    .      .
 DI2      H152   C15    .      .
 DI2      H151   C15    .      .
 DI2      N3     C14    C13    .
 DI2      HN3    N3     .      .
 DI2      C13    N3     C11    .
 DI2      H13    C13    .      .
 DI2      C12    C13    C20    .
 DI2      H121   C12    .      .
 DI2      H122   C12    .      .
 DI2      C20    C12    C21    .
 DI2      C19    C20    C18    .
 DI2      H19    C19    .      .
 DI2      C18    C19    C17    .
 DI2      H18    C18    .      .
 DI2      C17    C18    H17    .
 DI2      H17    C17    .      .
 DI2      C21    C20    C16    .
 DI2      H21    C21    .      .
 DI2      C16    C21    H16    .
 DI2      H16    C16    .      .
 DI2      C11    C13    N2     .
 DI2      O3     C11    .      .
 DI2      N2     C11    C6     .
 DI2      C10    N2     C9     .
 DI2      H101   C10    .      .
 DI2      H102   C10    .      .
 DI2      C9     C10    C8     .
 DI2      H91    C9     .      .
 DI2      H92    C9     .      .
 DI2      C8     C9     H81    .
 DI2      H82    C8     .      .
 DI2      H81    C8     .      .
 DI2      C6     N2     C7     .
 DI2      H6     C6     .      .
 DI2      C7     C6     N      .
 DI2      O2     C7     .      .
 DI2      N      C7     C      .
 DI2      HN     N      .      .
 DI2      C      N      C2     .
 DI2      H      C      .      .
 DI2      B1     C      O      .
 DI2      O1     B1     HO1    .
 DI2      HO1    O1     .      .
 DI2      O      B1     HO     .
 DI2      HO     O      .      .
 DI2      C2     C      C3     .
 DI2      H21A   C2     .      .
 DI2      H22    C2     .      .
 DI2      C3     C2     C4     .
 DI2      H31    C3     .      .
 DI2      H32    C3     .      .
 DI2      C4     C3     C5     .
 DI2      H41    C4     .      .
 DI2      H42    C4     .      .
 DI2      C5     C4     N1     .
 DI2      H51    C5     .      .
 DI2      H52    C5     .      .
 DI2      N1     C5     HN11   .
 DI2      HN12   N1     .      .
 DI2      HN11   N1     .      END
 DI2      C6     C8     .    ADD
 DI2      C16    C17    .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 DI2      B1     C         single      1.600    0.020
 DI2      O      B1        single      1.535    0.020
 DI2      O1     B1        single      1.535    0.020
 DI2      C2     C         single      1.524    0.020
 DI2      C      N         single      1.450    0.020
 DI2      H      C         single      1.099    0.020
 DI2      C3     C2        single      1.524    0.020
 DI2      H21A   C2        single      1.092    0.020
 DI2      H22    C2        single      1.092    0.020
 DI2      C4     C3        single      1.524    0.020
 DI2      H31    C3        single      1.092    0.020
 DI2      H32    C3        single      1.092    0.020
 DI2      C5     C4        single      1.524    0.020
 DI2      H41    C4        single      1.092    0.020
 DI2      H42    C4        single      1.092    0.020
 DI2      N1     C5        single      1.450    0.020
 DI2      H51    C5        single      1.092    0.020
 DI2      H52    C5        single      1.092    0.020
 DI2      C7     C6        single      1.500    0.020
 DI2      C6     C8        single      1.524    0.020
 DI2      C6     N2        single      1.455    0.020
 DI2      H6     C6        single      1.099    0.020
 DI2      N      C7        single      1.330    0.020
 DI2      O2     C7        double      1.220    0.020
 DI2      C8     C9        single      1.524    0.020
 DI2      H81    C8        single      1.092    0.020
 DI2      H82    C8        single      1.092    0.020
 DI2      C9     C10       single      1.524    0.020
 DI2      H91    C9        single      1.092    0.020
 DI2      H92    C9        single      1.092    0.020
 DI2      C10    N2        single      1.455    0.020
 DI2      H101   C10       single      1.092    0.020
 DI2      H102   C10       single      1.092    0.020
 DI2      C11    C13       single      1.500    0.020
 DI2      N2     C11       single      1.330    0.020
 DI2      O3     C11       double      1.220    0.020
 DI2      C12    C13       single      1.524    0.020
 DI2      C20    C12       single      1.511    0.020
 DI2      H121   C12       single      1.092    0.020
 DI2      H122   C12       single      1.092    0.020
 DI2      C13    N3        single      1.450    0.020
 DI2      H13    C13       single      1.099    0.020
 DI2      C15    C14       single      1.500    0.020
 DI2      N3     C14       single      1.330    0.020
 DI2      C14    O4        double      1.220    0.020
 DI2      H151   C15       single      1.059    0.020
 DI2      H152   C15       single      1.059    0.020
 DI2      H153   C15       single      1.059    0.020
 DI2      C16    C17       double      1.390    0.020
 DI2      C16    C21       single      1.390    0.020
 DI2      H16    C16       single      1.083    0.020
 DI2      C17    C18       single      1.390    0.020
 DI2      H17    C17       single      1.083    0.020
 DI2      C18    C19       double      1.390    0.020
 DI2      H18    C18       single      1.083    0.020
 DI2      C19    C20       single      1.390    0.020
 DI2      H19    C19       single      1.083    0.020
 DI2      C21    C20       double      1.390    0.020
 DI2      H21    C21       single      1.083    0.020
 DI2      HN     N         single      1.010    0.020
 DI2      HN11   N1        single      1.010    0.020
 DI2      HN12   N1        single      1.010    0.020
 DI2      HN3    N3        single      1.010    0.020
 DI2      HO     O         single      0.967    0.020
 DI2      HO1    O1        single      0.967    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 DI2      O4     C14    C15     123.000    3.000
 DI2      O4     C14    N3      123.000    3.000
 DI2      C15    C14    N3      116.500    3.000
 DI2      C14    C15    H153    109.470    3.000
 DI2      C14    C15    H152    109.470    3.000
 DI2      C14    C15    H151    109.470    3.000
 DI2      H153   C15    H152    109.470    3.000
 DI2      H153   C15    H151    109.470    3.000
 DI2      H152   C15    H151    109.470    3.000
 DI2      C14    N3     HN3     120.000    3.000
 DI2      C14    N3     C13     121.500    3.000
 DI2      HN3    N3     C13     118.500    3.000
 DI2      N3     C13    H13     108.550    3.000
 DI2      N3     C13    C12     110.000    3.000
 DI2      N3     C13    C11     111.600    3.000
 DI2      H13    C13    C12     108.340    3.000
 DI2      H13    C13    C11     108.810    3.000
 DI2      C12    C13    C11     109.470    3.000
 DI2      C13    C12    H121    109.470    3.000
 DI2      C13    C12    H122    109.470    3.000
 DI2      C13    C12    C20     109.470    3.000
 DI2      H121   C12    H122    107.900    3.000
 DI2      H121   C12    C20     109.470    3.000
 DI2      H122   C12    C20     109.470    3.000
 DI2      C12    C20    C19     120.000    3.000
 DI2      C12    C20    C21     120.000    3.000
 DI2      C19    C20    C21     120.000    3.000
 DI2      C20    C19    H19     120.000    3.000
 DI2      C20    C19    C18     120.000    3.000
 DI2      H19    C19    C18     120.000    3.000
 DI2      C19    C18    H18     120.000    3.000
 DI2      C19    C18    C17     120.000    3.000
 DI2      H18    C18    C17     120.000    3.000
 DI2      C18    C17    H17     120.000    3.000
 DI2      C18    C17    C16     120.000    3.000
 DI2      H17    C17    C16     120.000    3.000
 DI2      C20    C21    H21     120.000    3.000
 DI2      C20    C21    C16     120.000    3.000
 DI2      H21    C21    C16     120.000    3.000
 DI2      C21    C16    H16     120.000    3.000
 DI2      C21    C16    C17     120.000    3.000
 DI2      H16    C16    C17     120.000    3.000
 DI2      C13    C11    O3      120.500    3.000
 DI2      C13    C11    N2      116.500    3.000
 DI2      O3     C11    N2      123.000    3.000
 DI2      C11    N2     C10     127.000    3.000
 DI2      C11    N2     C6      121.000    3.000
 DI2      C10    N2     C6      112.000    3.000
 DI2      N2     C10    H101    109.470    3.000
 DI2      N2     C10    H102    109.470    3.000
 DI2      N2     C10    C9      105.000    3.000
 DI2      H101   C10    H102    107.900    3.000
 DI2      H101   C10    C9      109.470    3.000
 DI2      H102   C10    C9      109.470    3.000
 DI2      C10    C9     H91     109.470    3.000
 DI2      C10    C9     H92     109.470    3.000
 DI2      C10    C9     C8      111.000    3.000
 DI2      H91    C9     H92     107.900    3.000
 DI2      H91    C9     C8      109.470    3.000
 DI2      H92    C9     C8      109.470    3.000
 DI2      C9     C8     H82     109.470    3.000
 DI2      C9     C8     H81     109.470    3.000
 DI2      C9     C8     C6      111.000    3.000
 DI2      H82    C8     H81     107.900    3.000
 DI2      H82    C8     C6      109.470    3.000
 DI2      H81    C8     C6      109.470    3.000
 DI2      N2     C6     H6      109.470    3.000
 DI2      N2     C6     C7      111.600    3.000
 DI2      N2     C6     C8      105.000    3.000
 DI2      H6     C6     C7      108.810    3.000
 DI2      H6     C6     C8      108.340    3.000
 DI2      C7     C6     C8      109.470    3.000
 DI2      C6     C7     O2      120.500    3.000
 DI2      C6     C7     N       116.500    3.000
 DI2      O2     C7     N       123.000    3.000
 DI2      C7     N      HN      120.000    3.000
 DI2      C7     N      C       121.500    3.000
 DI2      HN     N      C       118.500    3.000
 DI2      N      C      H       108.550    3.000
 DI2      N      C      B1      109.500    3.000
 DI2      N      C      C2      110.000    3.000
 DI2      H      C      B1      109.470    3.000
 DI2      H      C      C2      108.340    3.000
 DI2      B1     C      C2      109.470    3.000
 DI2      C      B1     O1      120.000    3.000
 DI2      C      B1     O       120.000    3.000
 DI2      O1     B1     O       120.000    3.000
 DI2      B1     O1     HO1     120.000    3.000
 DI2      B1     O      HO      120.000    3.000
 DI2      C      C2     H21A    109.470    3.000
 DI2      C      C2     H22     109.470    3.000
 DI2      C      C2     C3      111.000    3.000
 DI2      H21A   C2     H22     107.900    3.000
 DI2      H21A   C2     C3      109.470    3.000
 DI2      H22    C2     C3      109.470    3.000
 DI2      C2     C3     H31     109.470    3.000
 DI2      C2     C3     H32     109.470    3.000
 DI2      C2     C3     C4      111.000    3.000
 DI2      H31    C3     H32     107.900    3.000
 DI2      H31    C3     C4      109.470    3.000
 DI2      H32    C3     C4      109.470    3.000
 DI2      C3     C4     H41     109.470    3.000
 DI2      C3     C4     H42     109.470    3.000
 DI2      C3     C4     C5      111.000    3.000
 DI2      H41    C4     H42     107.900    3.000
 DI2      H41    C4     C5      109.470    3.000
 DI2      H42    C4     C5      109.470    3.000
 DI2      C4     C5     H51     109.470    3.000
 DI2      C4     C5     H52     109.470    3.000
 DI2      C4     C5     N1      109.470    3.000
 DI2      H51    C5     H52     107.900    3.000
 DI2      H51    C5     N1      109.470    3.000
 DI2      H52    C5     N1      109.470    3.000
 DI2      C5     N1     HN12    120.000    3.000
 DI2      C5     N1     HN11    120.000    3.000
 DI2      HN12   N1     HN11    120.000    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 DI2      var_1    O4     C14    C15    H151      -0.124   20.000   1
 DI2      CONST_1  O4     C14    N3     C13        0.000    0.000   0
 DI2      var_2    C14    N3     C13    C11      -60.013   20.000   3
 DI2      var_3    N3     C13    C12    C20       60.051   20.000   3
 DI2      var_4    C13    C12    C20    C21      -90.311   20.000   2
 DI2      CONST_2  C12    C20    C19    C18      180.000    0.000   0
 DI2      CONST_3  C20    C19    C18    C17        0.000    0.000   0
 DI2      CONST_4  C19    C18    C17    C16        0.000    0.000   0
 DI2      CONST_5  C12    C20    C21    C16      180.000    0.000   0
 DI2      CONST_6  C20    C21    C16    C17        0.000    0.000   0
 DI2      CONST_7  C21    C16    C17    C18        0.000    0.000   0
 DI2      var_5    N3     C13    C11    N2      -150.029   20.000   3
 DI2      CONST_8  C13    C11    N2     C6       180.000    0.000   0
 DI2      var_6    C11    N2     C10    C9      -150.000   20.000   1
 DI2      var_7    N2     C10    C9     C8       -30.000   20.000   3
 DI2      var_8    C10    C9     C8     C6        30.000   20.000   3
 DI2      var_9    C11    N2     C6     C7       -60.000   20.000   3
 DI2      var_10   N2     C6     C8     C9       -30.000   20.000   3
 DI2      var_11   N2     C6     C7     N       -179.503   20.000   3
 DI2      CONST_9  C6     C7     N      C        180.000    0.000   0
 DI2      var_12   C7     N      C      C2       150.066   20.000   3
 DI2      var_13   N      C      B1     O        -59.976   20.000   1
 DI2      var_14   C      B1     O1     HO1        0.008   20.000   1
 DI2      var_15   C      B1     O      HO       179.961   20.000   1
 DI2      var_16   N      C      C2     C3      -179.966   20.000   3
 DI2      var_17   C      C2     C3     C4       179.948   20.000   3
 DI2      var_18   C2     C3     C4     C5       180.000   20.000   3
 DI2      var_19   C3     C4     C5     N1      -179.989   20.000   3
 DI2      var_20   C4     C5     N1     HN11     179.954   20.000   1
loop_
_chem_comp_chir.comp_id
_chem_comp_chir.id
_chem_comp_chir.atom_id_centre
_chem_comp_chir.atom_id_1
_chem_comp_chir.atom_id_2
_chem_comp_chir.atom_id_3
_chem_comp_chir.volume_sign
 DI2      chir_01  C      B1     C2     N         positiv
 DI2      chir_02  C6     C7     C8     N2        positiv
 DI2      chir_03  C13    C11    C12    N3        negativ
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 DI2      plan-1    C7        0.020
 DI2      plan-1    C6        0.020
 DI2      plan-1    N         0.020
 DI2      plan-1    O2        0.020
 DI2      plan-1    HN        0.020
 DI2      plan-2    C11       0.020
 DI2      plan-2    C13       0.020
 DI2      plan-2    N2        0.020
 DI2      plan-2    O3        0.020
 DI2      plan-3    C14       0.020
 DI2      plan-3    C15       0.020
 DI2      plan-3    N3        0.020
 DI2      plan-3    O4        0.020
 DI2      plan-3    HN3       0.020
 DI2      plan-4    C16       0.020
 DI2      plan-4    C17       0.020
 DI2      plan-4    C21       0.020
 DI2      plan-4    H16       0.020
 DI2      plan-4    C18       0.020
 DI2      plan-4    C19       0.020
 DI2      plan-4    C20       0.020
 DI2      plan-4    H17       0.020
 DI2      plan-4    H18       0.020
 DI2      plan-4    H19       0.020
 DI2      plan-4    C12       0.020
 DI2      plan-4    H21       0.020
 DI2      plan-5    N         0.020
 DI2      plan-5    C         0.020
 DI2      plan-5    C7        0.020
 DI2      plan-5    HN        0.020
 DI2      plan-6    N1        0.020
 DI2      plan-6    C5        0.020
 DI2      plan-6    HN11      0.020
 DI2      plan-6    HN12      0.020
 DI2      plan-7    N2        0.020
 DI2      plan-7    C6        0.020
 DI2      plan-7    C10       0.020
 DI2      plan-7    C11       0.020
 DI2      plan-8    N3        0.020
 DI2      plan-8    C13       0.020
 DI2      plan-8    C14       0.020
 DI2      plan-8    HN3       0.020
# ------------------------------------------------------