File: DLN.cif

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global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
DLN      DLN '3-{[4-amino-1-(1-methylethyl)-1H-pyr' non-polymer        37  22 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_DLN
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 DLN           O18    O    OH1       0.000      0.000    0.000    0.000
 DLN           H18    H    H         0.000      0.249   -0.203   -0.912
 DLN           C14    C    CR6       0.000     -1.057    0.856    0.001
 DLN           C13    C    CR16      0.000     -2.348    0.359    0.002
 DLN           H13    H    H         0.000     -2.519   -0.710    0.001
 DLN           C15    C    CR16      0.000     -0.838    2.228    0.001
 DLN           H15    H    H         0.000      0.174    2.613    0.006
 DLN           C16    C    CR16      0.000     -1.908    3.104   -0.004
 DLN           H16    H    H         0.000     -1.731    4.172   -0.009
 DLN           C17    C    CR16      0.000     -3.201    2.622   -0.002
 DLN           H17    H    H         0.000     -4.036    3.311   -0.004
 DLN           C12    C    CR6       0.000     -3.431    1.243    0.003
 DLN           C11    C    CSP       0.000     -4.771    0.738    0.003
 DLN           CAM    C    CSP       0.000     -5.869    0.324    0.003
 DLN           CAI    C    CR5       0.000     -7.209   -0.181    0.003
 DLN           N8     N    NRD5      0.000     -8.112    0.002   -0.936
 DLN           C4     C    CR56      0.000     -7.830   -0.996    1.051
 DLN           C5     C    CR6       0.000     -7.408   -1.516    2.284
 DLN           N10    N    NH2       0.000     -6.125   -1.291    2.746
 DLN           H102   H    H         0.000     -5.469   -0.744    2.197
 DLN           H101   H    H         0.000     -5.824   -1.670    3.638
 DLN           N6     N    NRD6      0.000     -8.272   -2.232    2.997
 DLN           C1     C    CR16      0.000     -9.500   -2.450    2.560
 DLN           H1     H    H         0.000    -10.172   -3.039    3.172
 DLN           N2     N    NRD6      0.000     -9.939   -1.982    1.413
 DLN           C3     C    CR56      0.000     -9.147   -1.253    0.627
 DLN           N7     N    NR5       0.000     -9.301   -0.645   -0.583
 DLN           C19    C    CH1       0.000    -10.527   -0.659   -1.386
 DLN           H19    H    H         0.000    -11.300   -1.240   -0.865
 DLN           C21    C    CH3       0.000    -10.237   -1.298   -2.746
 DLN           H213   H    H         0.000     -9.895   -2.291   -2.605
 DLN           H212   H    H         0.000    -11.122   -1.310   -3.328
 DLN           H211   H    H         0.000     -9.491   -0.738   -3.249
 DLN           C20    C    CH3       0.000    -11.018    0.775   -1.592
 DLN           H203   H    H         0.000    -11.218    1.219   -0.651
 DLN           H202   H    H         0.000    -10.273    1.336   -2.095
 DLN           H201   H    H         0.000    -11.904    0.765   -2.173
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 DLN      O18    n/a    C14    START
 DLN      H18    O18    .      .
 DLN      C14    O18    C15    .
 DLN      C13    C14    H13    .
 DLN      H13    C13    .      .
 DLN      C15    C14    C16    .
 DLN      H15    C15    .      .
 DLN      C16    C15    C17    .
 DLN      H16    C16    .      .
 DLN      C17    C16    C12    .
 DLN      H17    C17    .      .
 DLN      C12    C17    C11    .
 DLN      C11    C12    CAM    .
 DLN      CAM    C11    CAI    .
 DLN      CAI    CAM    C4     .
 DLN      N8     CAI    .      .
 DLN      C4     CAI    C3     .
 DLN      C5     C4     N6     .
 DLN      N10    C5     H101   .
 DLN      H102   N10    .      .
 DLN      H101   N10    .      .
 DLN      N6     C5     C1     .
 DLN      C1     N6     N2     .
 DLN      H1     C1     .      .
 DLN      N2     C1     .      .
 DLN      C3     C4     N7     .
 DLN      N7     C3     C19    .
 DLN      C19    N7     C20    .
 DLN      H19    C19    .      .
 DLN      C21    C19    H211   .
 DLN      H213   C21    .      .
 DLN      H212   C21    .      .
 DLN      H211   C21    .      .
 DLN      C20    C19    H201   .
 DLN      H203   C20    .      .
 DLN      H202   C20    .      .
 DLN      H201   C20    .      END
 DLN      N7     N8     .    ADD
 DLN      C3     N2     .    ADD
 DLN      C12    C13    .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 DLN      C20    C19       single      1.524    0.020
 DLN      C21    C19       single      1.524    0.020
 DLN      C19    N7        single      1.485    0.020
 DLN      N7     N8        single      1.402    0.020
 DLN      N7     C3        single      1.337    0.020
 DLN      N8     CAI       double      1.350    0.020
 DLN      C3     N2        single      1.355    0.020
 DLN      C3     C4        double      1.490    0.020
 DLN      N2     C1        double      1.337    0.020
 DLN      C1     N6        single      1.337    0.020
 DLN      N6     C5        double      1.350    0.020
 DLN      N10    C5        single      1.355    0.020
 DLN      C5     C4        single      1.490    0.020
 DLN      C4     CAI       single      1.490    0.020
 DLN      C11    C12       single      1.285    0.020
 DLN      CAM    C11       triple      1.180    0.020
 DLN      C12    C13       single      1.390    0.020
 DLN      C12    C17       double      1.390    0.020
 DLN      C13    C14       double      1.390    0.020
 DLN      C17    C16       single      1.390    0.020
 DLN      C16    C15       double      1.390    0.020
 DLN      C15    C14       single      1.390    0.020
 DLN      C14    O18       single      1.362    0.020
 DLN      CAI    CAM       single      1.335    0.020
 DLN      H201   C20       single      1.059    0.020
 DLN      H202   C20       single      1.059    0.020
 DLN      H203   C20       single      1.059    0.020
 DLN      H19    C19       single      1.099    0.020
 DLN      H211   C21       single      1.059    0.020
 DLN      H212   C21       single      1.059    0.020
 DLN      H213   C21       single      1.059    0.020
 DLN      H1     C1        single      1.083    0.020
 DLN      H101   N10       single      1.010    0.020
 DLN      H102   N10       single      1.010    0.020
 DLN      H13    C13       single      1.083    0.020
 DLN      H17    C17       single      1.083    0.020
 DLN      H16    C16       single      1.083    0.020
 DLN      H15    C15       single      1.083    0.020
 DLN      H18    O18       single      0.967    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 DLN      H18    O18    C14     109.470    3.000
 DLN      O18    C14    C13     120.000    3.000
 DLN      O18    C14    C15     120.000    3.000
 DLN      C13    C14    C15     120.000    3.000
 DLN      C14    C13    H13     120.000    3.000
 DLN      C14    C13    C12     120.000    3.000
 DLN      H13    C13    C12     120.000    3.000
 DLN      C14    C15    H15     120.000    3.000
 DLN      C14    C15    C16     120.000    3.000
 DLN      H15    C15    C16     120.000    3.000
 DLN      C15    C16    H16     120.000    3.000
 DLN      C15    C16    C17     120.000    3.000
 DLN      H16    C16    C17     120.000    3.000
 DLN      C16    C17    H17     120.000    3.000
 DLN      C16    C17    C12     120.000    3.000
 DLN      H17    C17    C12     120.000    3.000
 DLN      C17    C12    C11     120.000    3.000
 DLN      C17    C12    C13     120.000    3.000
 DLN      C11    C12    C13     120.000    3.000
 DLN      C12    C11    CAM     180.000    3.000
 DLN      C11    CAM    CAI     180.000    3.000
 DLN      CAM    CAI    N8      108.000    3.000
 DLN      CAM    CAI    C4      108.000    3.000
 DLN      N8     CAI    C4      108.000    3.000
 DLN      CAI    N8     N7      108.000    3.000
 DLN      CAI    C4     C5      132.000    3.000
 DLN      CAI    C4     C3      108.000    3.000
 DLN      C5     C4     C3      120.000    3.000
 DLN      C4     C5     N10     120.000    3.000
 DLN      C4     C5     N6      120.000    3.000
 DLN      N10    C5     N6      120.000    3.000
 DLN      C5     N10    H102    120.000    3.000
 DLN      C5     N10    H101    120.000    3.000
 DLN      H102   N10    H101    120.000    3.000
 DLN      C5     N6     C1      120.000    3.000
 DLN      N6     C1     H1      120.000    3.000
 DLN      N6     C1     N2      120.000    3.000
 DLN      H1     C1     N2      120.000    3.000
 DLN      C1     N2     C3      120.000    3.000
 DLN      C4     C3     N7      108.000    3.000
 DLN      C4     C3     N2      120.000    3.000
 DLN      N7     C3     N2      132.000    3.000
 DLN      C3     N7     C19     126.000    3.000
 DLN      C3     N7     N8      108.000    3.000
 DLN      C19    N7     N8      108.000    3.000
 DLN      N7     C19    H19     109.470    3.000
 DLN      N7     C19    C21     109.500    3.000
 DLN      N7     C19    C20     109.500    3.000
 DLN      H19    C19    C21     108.340    3.000
 DLN      H19    C19    C20     108.340    3.000
 DLN      C21    C19    C20     111.000    3.000
 DLN      C19    C21    H213    109.470    3.000
 DLN      C19    C21    H212    109.470    3.000
 DLN      C19    C21    H211    109.470    3.000
 DLN      H213   C21    H212    109.470    3.000
 DLN      H213   C21    H211    109.470    3.000
 DLN      H212   C21    H211    109.470    3.000
 DLN      C19    C20    H203    109.470    3.000
 DLN      C19    C20    H202    109.470    3.000
 DLN      C19    C20    H201    109.470    3.000
 DLN      H203   C20    H202    109.470    3.000
 DLN      H203   C20    H201    109.470    3.000
 DLN      H202   C20    H201    109.470    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 DLN      var_1    H18    O18    C14    C15      -90.050   20.000   1
 DLN      CONST_1  O18    C14    C13    C12      180.000    0.000   0
 DLN      CONST_2  O18    C14    C15    C16      180.000    0.000   0
 DLN      CONST_3  C14    C15    C16    C17        0.000    0.000   0
 DLN      CONST_4  C15    C16    C17    C12        0.000    0.000   0
 DLN      CONST_5  C16    C17    C12    C11      180.000    0.000   0
 DLN      CONST_6  C17    C12    C13    C14        0.000    0.000   0
 DLN      var_2    C17    C12    C11    CAM      121.269   20.000   1
 DLN      var_3    C12    C11    CAM    CAI      -58.737   20.000   1
 DLN      var_4    C11    CAM    CAI    C4       179.878   20.000   1
 DLN      CONST_7  CAM    CAI    N8     N7       180.000    0.000   0
 DLN      CONST_8  CAM    CAI    C4     C3       180.000    0.000   0
 DLN      CONST_9  CAI    C4     C5     N6       180.000    0.000   0
 DLN      CONST_10 C4     C5     N10    H101    -179.968    0.000   0
 DLN      CONST_11 C4     C5     N6     C1         0.000    0.000   0
 DLN      CONST_12 C5     N6     C1     N2         0.000    0.000   0
 DLN      CONST_13 N6     C1     N2     C3         0.000    0.000   0
 DLN      CONST_14 CAI    C4     C3     N7         0.000    0.000   0
 DLN      CONST_15 C4     C3     N2     C1         0.000    0.000   0
 DLN      CONST_16 C4     C3     N7     C19      180.000    0.000   0
 DLN      CONST_17 C3     N7     N8     CAI        0.000    0.000   0
 DLN      var_5    C3     N7     C19    C20      119.696   20.000   1
 DLN      var_6    N7     C19    C21    H211     -60.037   20.000   3
 DLN      var_7    N7     C19    C20    H201     179.998   20.000   3
loop_
_chem_comp_chir.comp_id
_chem_comp_chir.id
_chem_comp_chir.atom_id_centre
_chem_comp_chir.atom_id_1
_chem_comp_chir.atom_id_2
_chem_comp_chir.atom_id_3
_chem_comp_chir.volume_sign
 DLN      chir_01  C19    C20    C21    N7        negativ
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 DLN      plan-1    N7        0.020
 DLN      plan-1    C19       0.020
 DLN      plan-1    N8        0.020
 DLN      plan-1    C3        0.020
 DLN      plan-1    CAI       0.020
 DLN      plan-1    N2        0.020
 DLN      plan-1    C4        0.020
 DLN      plan-1    C1        0.020
 DLN      plan-1    N6        0.020
 DLN      plan-1    C5        0.020
 DLN      plan-1    H1        0.020
 DLN      plan-1    N10       0.020
 DLN      plan-1    CAM       0.020
 DLN      plan-1    H102      0.020
 DLN      plan-1    H101      0.020
 DLN      plan-2    N10       0.020
 DLN      plan-2    C5        0.020
 DLN      plan-2    H101      0.020
 DLN      plan-2    H102      0.020
 DLN      plan-3    C12       0.020
 DLN      plan-3    C11       0.020
 DLN      plan-3    C13       0.020
 DLN      plan-3    C17       0.020
 DLN      plan-3    C16       0.020
 DLN      plan-3    C15       0.020
 DLN      plan-3    C14       0.020
 DLN      plan-3    H13       0.020
 DLN      plan-3    H17       0.020
 DLN      plan-3    H16       0.020
 DLN      plan-3    H15       0.020
 DLN      plan-3    O18       0.020
# ------------------------------------------------------