File: DPO.cif

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global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
DPO      DPO 'DIPHOSPHATE                         ' non-polymer         9   9 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_DPO
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 DPO           O7     O    OP       -0.666      0.000    0.000    0.000
 DPO           P2     P    P         0.000     -0.651    0.728    1.156
 DPO           O5     O    OP       -0.666     -0.737    2.205    0.836
 DPO           O6     O    OP       -0.666      0.176    0.530    2.407
 DPO           O4     O    O2        0.000     -2.132    0.143    1.391
 DPO           P1     P    P         0.000     -2.772   -0.109   -0.064
 DPO           O1     O    OP       -0.666     -1.917   -1.100   -0.825
 DPO           O2     O    OP       -0.666     -2.825    1.197   -0.825
 DPO           O3     O    OP       -0.666     -4.172   -0.663    0.089
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 DPO      O7     n/a    P2     START
 DPO      P2     O7     O4     .
 DPO      O5     P2     .      .
 DPO      O6     P2     .      .
 DPO      O4     P2     P1     .
 DPO      P1     O4     O3     .
 DPO      O1     P1     .      .
 DPO      O2     P1     .      .
 DPO      O3     P1     .      END
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 DPO      O1     P1        deloc       1.510    0.020
 DPO      O2     P1        deloc       1.510    0.020
 DPO      O3     P1        deloc       1.510    0.020
 DPO      P1     O4        single      1.610    0.020
 DPO      O4     P2        single      1.610    0.020
 DPO      O5     P2        deloc       1.510    0.020
 DPO      O6     P2        deloc       1.510    0.020
 DPO      P2     O7        deloc       1.510    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 DPO      O7     P2     O5      119.900    3.000
 DPO      O7     P2     O6      119.900    3.000
 DPO      O7     P2     O4      108.200    3.000
 DPO      O5     P2     O6      119.900    3.000
 DPO      O5     P2     O4      108.200    3.000
 DPO      O6     P2     O4      108.200    3.000
 DPO      P2     O4     P1      120.500    3.000
 DPO      O4     P1     O1      108.200    3.000
 DPO      O4     P1     O2      108.200    3.000
 DPO      O4     P1     O3      108.200    3.000
 DPO      O1     P1     O2      119.900    3.000
 DPO      O1     P1     O3      119.900    3.000
 DPO      O2     P1     O3      119.900    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 DPO      var_1    O7     P2     O4     P1       -39.965   20.000   1
 DPO      var_2    P2     O4     P1     O3       180.000   20.000   1
# ------------------------------------------------------