1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130
|
global_
_lib_name ?
_lib_version ?
_lib_update ?
# ------------------------------------------------
#
# --- LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
HGU HGU 'N-HYDROXYGUANIDINE ' non-polymer 10 5 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_HGU
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
HGU NH1 N N 0.000 0.000 0.000 0.000
HGU HN1 H H 0.000 0.285 0.000 -0.919
HGU C C C 0.000 -1.267 0.000 0.307
HGU NH2 N NH2 0.000 -1.653 0.000 1.627
HGU HN22 H H 0.000 -2.638 0.000 1.881
HGU HN21 H H 0.000 -0.959 0.000 2.372
HGU N N NH1 0.000 -2.214 0.000 -0.686
HGU HN H H 0.000 -3.196 0.000 -0.447
HGU O O OH1 0.000 -1.817 0.000 -2.045
HGU HO H H 0.000 -2.483 0.000 -2.751
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
HGU NH1 n/a C START
HGU HN1 NH1 . .
HGU C NH1 N .
HGU NH2 C HN21 .
HGU HN22 NH2 . .
HGU HN21 NH2 . .
HGU N C O .
HGU HN N . .
HGU O N HO .
HGU HO O . END
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
HGU O N single 1.392 0.020
HGU HO O single 0.967 0.020
HGU N C single 1.330 0.020
HGU HN N single 1.010 0.020
HGU C NH1 double 1.260 0.020
HGU NH2 C single 1.332 0.020
HGU HN1 NH1 single 0.954 0.020
HGU HN21 NH2 single 1.010 0.020
HGU HN22 NH2 single 1.010 0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
HGU HN1 NH1 C 120.000 3.000
HGU NH1 C NH2 120.000 3.000
HGU NH1 C N 120.000 3.000
HGU NH2 C N 120.000 3.000
HGU C NH2 HN22 120.000 3.000
HGU C NH2 HN21 120.000 3.000
HGU HN22 NH2 HN21 120.000 3.000
HGU C N HN 120.000 3.000
HGU C N O 120.000 3.000
HGU HN N O 120.200 3.000
HGU N O HO 120.000 3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
HGU CONST_1 HN1 NH1 C N 0.000 0.000 0
HGU CONST_2 NH1 C NH2 HN21 0.000 0.000 0
HGU CONST_3 NH1 C N O 0.000 0.000 0
HGU var_1 C N O HO 180.000 20.000 1
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
HGU plan-1 N 0.020
HGU plan-1 O 0.020
HGU plan-1 C 0.020
HGU plan-1 HN 0.020
HGU plan-2 C 0.020
HGU plan-2 N 0.020
HGU plan-2 NH1 0.020
HGU plan-2 NH2 0.020
HGU plan-2 HN1 0.020
HGU plan-2 HN 0.020
HGU plan-2 HN22 0.020
HGU plan-2 HN21 0.020
HGU plan-3 NH2 0.020
HGU plan-3 C 0.020
HGU plan-3 HN21 0.020
HGU plan-3 HN22 0.020
# ------------------------------------------------------
|