1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185
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#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
MAN-b-D MAN 'beta_D_mannose ' D-pyranose 24 12 .
#
data_comp_MAN-b-D
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
MAN-b-D C1 C CH1 0.000
MAN-b-D H1 H HCH1 0.000
MAN-b-D O1 O OH1 0.000
MAN-b-D HO1 H HOH1 0.000
MAN-b-D C2 C CH1 0.000
MAN-b-D H2 H HCH1 0.000
MAN-b-D O2 O OH1 0.000
MAN-b-D HO2 H HOH1 0.000
MAN-b-D C3 C CH1 0.000
MAN-b-D H3 H HCH1 0.000
MAN-b-D O3 O OH1 0.000
MAN-b-D HO3 H HOH1 0.000
MAN-b-D C4 C CH1 0.000
MAN-b-D H4 H HCH1 0.000
MAN-b-D O4 O OH1 0.000
MAN-b-D HO4 H HOH1 0.000
MAN-b-D C5 C CH1 0.000
MAN-b-D H5 H HCH1 0.000
MAN-b-D C6 C CH2 0.000
MAN-b-D H61 H HCH2 0.000
MAN-b-D H62 H HCH2 0.000
MAN-b-D O6 O OH1 0.000
MAN-b-D HO6 H HOH1 0.000
MAN-b-D O5 O O2 0.000
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
MAN-b-D C1 n/a C2 START
MAN-b-D H1 C1 . .
MAN-b-D O1 C1 HO1 .
MAN-b-D HO1 O1 . .
MAN-b-D C2 C1 C3 .
MAN-b-D H2 C2 . .
MAN-b-D O2 C2 HO2 .
MAN-b-D HO2 O2 . .
MAN-b-D C3 C2 C4 .
MAN-b-D H3 C3 . .
MAN-b-D O3 C3 HO3 .
MAN-b-D HO3 O3 . .
MAN-b-D C4 C3 C5 .
MAN-b-D H4 C4 . .
MAN-b-D O4 C4 HO4 .
MAN-b-D HO4 O4 . .
MAN-b-D C5 C4 O5 .
MAN-b-D H5 C5 . .
MAN-b-D C6 C5 O6 .
MAN-b-D H61 C6 . .
MAN-b-D H62 C6 . .
MAN-b-D O6 C6 HO6 .
MAN-b-D HO6 O6 . .
MAN-b-D O5 C5 . END
MAN-b-D O5 C1 . ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
MAN-b-D O1 C1 single 1.410 0.020
MAN-b-D C2 C1 single 1.524 0.020
MAN-b-D O2 C2 single 1.410 0.020
MAN-b-D C3 C2 single 1.524 0.020
MAN-b-D O3 C3 single 1.410 0.020
MAN-b-D C4 C3 single 1.524 0.020
MAN-b-D O4 C4 single 1.410 0.020
MAN-b-D C5 C4 single 1.524 0.020
MAN-b-D C6 C5 single 1.524 0.020
MAN-b-D O6 C6 single 1.410 0.020
MAN-b-D O5 C5 single 1.410 0.020
MAN-b-D H1 C1 single 1.090 0.020
MAN-b-D HO1 O1 single 0.980 0.020
MAN-b-D H2 C2 single 1.090 0.020
MAN-b-D HO2 O2 single 0.980 0.020
MAN-b-D H3 C3 single 1.090 0.020
MAN-b-D HO3 O3 single 0.980 0.020
MAN-b-D H4 C4 single 1.090 0.020
MAN-b-D HO4 O4 single 0.980 0.020
MAN-b-D H5 C5 single 1.090 0.020
MAN-b-D H61 C6 single 1.090 0.020
MAN-b-D H62 C6 single 1.090 0.020
MAN-b-D HO6 O6 single 0.980 0.020
MAN-b-D C1 O5 single 1.410 0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
MAN-b-D H1 C1 O1 109.470 3.000
MAN-b-D O1 C1 C2 109.470 3.000
MAN-b-D H1 C1 O5 109.470 3.000
MAN-b-D H1 C1 C2 109.470 3.000
MAN-b-D C2 C1 O5 109.470 3.000
MAN-b-D O1 C1 O5 109.470 3.000
MAN-b-D C1 O1 HO1 109.470 3.000
MAN-b-D C1 C2 H2 108.340 3.000
MAN-b-D C1 C2 O2 109.470 3.000
MAN-b-D C1 C2 C3 111.000 3.000
MAN-b-D H2 C2 O2 109.470 3.000
MAN-b-D O2 C2 C3 109.470 3.000
MAN-b-D C2 O2 HO2 109.470 3.000
MAN-b-D C2 C3 H3 108.340 3.000
MAN-b-D C2 C3 O3 109.470 3.000
MAN-b-D C2 C3 C4 111.000 3.000
MAN-b-D H3 C3 O3 109.470 3.000
MAN-b-D O3 C3 C4 109.470 3.000
MAN-b-D C3 O3 HO3 109.470 3.000
MAN-b-D C3 C4 H4 108.340 3.000
MAN-b-D C3 C4 O4 109.470 3.000
MAN-b-D C3 C4 C5 111.000 3.000
MAN-b-D H4 C4 O4 109.470 3.000
MAN-b-D O4 C4 C5 109.470 3.000
MAN-b-D C4 O4 HO4 109.470 3.000
MAN-b-D C4 C5 H5 108.340 3.000
MAN-b-D C4 C5 C6 111.000 3.000
MAN-b-D C4 C5 O5 109.470 3.000
MAN-b-D H5 C5 C6 108.340 3.000
MAN-b-D C6 C5 O5 109.470 3.000
MAN-b-D C5 C6 H61 109.470 3.000
MAN-b-D C5 C6 H62 109.470 3.000
MAN-b-D C5 C6 O6 109.470 3.000
MAN-b-D H61 C6 H62 107.900 3.000
MAN-b-D H62 C6 O6 109.470 3.000
MAN-b-D C6 O6 HO6 109.470 3.000
MAN-b-D C5 O5 C1 111.800 3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
MAN-b-D var_1 C1 C2 O2 HO2 0.000 20.000 1
MAN-b-D var_2 C1 C2 C3 C4 -55.214 20.000 3
MAN-b-D var_3 C2 C3 O3 HO3 0.000 20.000 1
MAN-b-D var_4 C2 C3 C4 C5 57.978 20.000 3
MAN-b-D var_5 C3 C4 O4 HO4 0.000 20.000 1
MAN-b-D var_6 C3 C4 C5 O5 -60.478 20.000 3
MAN-b-D var_7 C4 C5 C6 O6 -172.061 20.000 3
MAN-b-D var_8 C5 C6 O6 HO6 0.000 20.000 1
MAN-b-D var_9 C4 C5 O5 C1 64.923 20.000 3
MAN-b-D var_10 C2 C1 O1 HO1 0.000 20.000 1
MAN-b-D var_11 C5 O5 C1 C2 -64.923 20.000 3
MAN-b-D var_12 O5 C1 C2 C3 64.923 20.000 3
loop_
_chem_comp_chir.comp_id
_chem_comp_chir.id
_chem_comp_chir.atom_id_centre
_chem_comp_chir.atom_id_1
_chem_comp_chir.atom_id_2
_chem_comp_chir.atom_id_3
_chem_comp_chir.volume_sign
MAN-b-D chir_01 C5 C4 O5 C6 positiv
MAN-b-D chir_02 C4 C3 O4 C5 positiv
MAN-b-D chir_03 C3 C2 O3 C4 negativ
MAN-b-D chir_04 C2 C1 O2 C3 negativ
MAN-b-D chir_05 C1 O1 O5 C2 positiv
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