File: MST.cif

package info (click to toggle)
refmac-dictionary 5.41-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 217,852 kB
file content (281 lines) | stat: -rw-r--r-- 12,295 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
MST      MST '2-T-BUTYLAMINO-4-ETHYLAMINO-6-METHYL' non-polymer        35  16 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_MST
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 MST           C16    C    CH3       0.000      0.000    0.000    0.000
 MST           H163   H    H         0.000      0.821   -0.001   -0.671
 MST           H162   H    H         0.000      0.048    0.865    0.611
 MST           H161   H    H         0.000      0.047   -0.864    0.612
 MST           C15    C    CH2       0.000     -1.310    0.000   -0.790
 MST           H152   H    H         0.000     -1.354   -0.891   -1.420
 MST           H151   H    H         0.000     -1.354    0.891   -1.420
 MST           N14    N    NH1       0.000     -2.441    0.000    0.140
 MST           H14    H    H         0.000     -2.276    0.000    1.136
 MST           C6     C    CR6       0.000     -3.733    0.000   -0.345
 MST           N1     N    NRD6      0.000     -3.951    0.004   -1.655
 MST           N5     N    NRD6      0.000     -4.760    0.000    0.500
 MST           C4     C    CR6       0.000     -6.005    0.000    0.034
 MST           N9     N    NH1       0.000     -7.070    0.000    0.910
 MST           H9     H    H         0.000     -6.904    0.000    1.907
 MST           C10    C    CT        0.000     -8.442    0.000    0.396
 MST           C13    C    CH3       0.000     -8.667   -1.249   -0.456
 MST           H131   H    H         0.000     -9.659   -1.250   -0.828
 MST           H132   H    H         0.000     -7.986   -1.251   -1.268
 MST           H133   H    H         0.000     -8.511   -2.114    0.136
 MST           C12    C    CH3       0.000     -8.666    1.249   -0.457
 MST           H121   H    H         0.000     -7.985    1.250   -1.269
 MST           H122   H    H         0.000     -9.658    1.250   -0.830
 MST           H123   H    H         0.000     -8.510    2.114    0.134
 MST           C11    C    CH3       0.000     -9.425    0.000    1.568
 MST           H111   H    H         0.000     -9.271   -0.865    2.160
 MST           H112   H    H         0.000     -9.271    0.865    2.160
 MST           H113   H    H         0.000    -10.418    0.000    1.197
 MST           N3     N    NRD6      0.000     -6.223    0.000   -1.277
 MST           C2     C    CR6       0.000     -5.197    0.000   -2.122
 MST           S7     S    S2        0.000     -5.486    0.000   -3.860
 MST           C8     C    CH3       0.000     -3.779    0.000   -4.463
 MST           H81    H    H         0.000     -3.270    0.865   -4.113
 MST           H82    H    H         0.000     -3.270   -0.865   -4.113
 MST           H83    H    H         0.000     -3.769    0.000   -5.525
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 MST      C16    n/a    C15    START
 MST      H163   C16    .      .
 MST      H162   C16    .      .
 MST      H161   C16    .      .
 MST      C15    C16    N14    .
 MST      H152   C15    .      .
 MST      H151   C15    .      .
 MST      N14    C15    C6     .
 MST      H14    N14    .      .
 MST      C6     N14    N5     .
 MST      N1     C6     .      .
 MST      N5     C6     C4     .
 MST      C4     N5     N3     .
 MST      N9     C4     C10    .
 MST      H9     N9     .      .
 MST      C10    N9     C11    .
 MST      C13    C10    H133   .
 MST      H131   C13    .      .
 MST      H132   C13    .      .
 MST      H133   C13    .      .
 MST      C12    C10    H123   .
 MST      H121   C12    .      .
 MST      H122   C12    .      .
 MST      H123   C12    .      .
 MST      C11    C10    H113   .
 MST      H111   C11    .      .
 MST      H112   C11    .      .
 MST      H113   C11    .      .
 MST      N3     C4     C2     .
 MST      C2     N3     S7     .
 MST      S7     C2     C8     .
 MST      C8     S7     H83    .
 MST      H81    C8     .      .
 MST      H82    C8     .      .
 MST      H83    C8     .      END
 MST      N1     C2     .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 MST      N1     C2        double      1.350    0.020
 MST      N1     C6        single      1.350    0.020
 MST      S7     C2        single      1.695    0.020
 MST      C2     N3        single      1.350    0.020
 MST      C8     S7        single      1.762    0.020
 MST      H83    C8        single      1.059    0.020
 MST      H82    C8        single      1.059    0.020
 MST      H81    C8        single      1.059    0.020
 MST      N3     C4        double      1.350    0.020
 MST      N9     C4        single      1.350    0.020
 MST      C4     N5        single      1.350    0.020
 MST      C10    N9        single      1.450    0.020
 MST      H9     N9        single      1.010    0.020
 MST      C11    C10       single      1.524    0.020
 MST      C12    C10       single      1.524    0.020
 MST      C13    C10       single      1.524    0.020
 MST      H113   C11       single      1.059    0.020
 MST      H112   C11       single      1.059    0.020
 MST      H111   C11       single      1.059    0.020
 MST      H123   C12       single      1.059    0.020
 MST      H122   C12       single      1.059    0.020
 MST      H121   C12       single      1.059    0.020
 MST      H133   C13       single      1.059    0.020
 MST      H132   C13       single      1.059    0.020
 MST      H131   C13       single      1.059    0.020
 MST      N5     C6        double      1.350    0.020
 MST      C6     N14       single      1.350    0.020
 MST      N14    C15       single      1.450    0.020
 MST      H14    N14       single      1.010    0.020
 MST      C15    C16       single      1.513    0.020
 MST      H152   C15       single      1.092    0.020
 MST      H151   C15       single      1.092    0.020
 MST      H163   C16       single      1.059    0.020
 MST      H162   C16       single      1.059    0.020
 MST      H161   C16       single      1.059    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 MST      H163   C16    H162    109.470    3.000
 MST      H163   C16    H161    109.470    3.000
 MST      H162   C16    H161    109.470    3.000
 MST      H163   C16    C15     109.470    3.000
 MST      H162   C16    C15     109.470    3.000
 MST      H161   C16    C15     109.470    3.000
 MST      C16    C15    H152    109.470    3.000
 MST      C16    C15    H151    109.470    3.000
 MST      C16    C15    N14     112.000    3.000
 MST      H152   C15    H151    107.900    3.000
 MST      H152   C15    N14     109.470    3.000
 MST      H151   C15    N14     109.470    3.000
 MST      C15    N14    H14     118.500    3.000
 MST      C15    N14    C6      120.000    3.000
 MST      H14    N14    C6      120.000    3.000
 MST      N14    C6     N1      120.000    3.000
 MST      N14    C6     N5      120.000    3.000
 MST      N1     C6     N5      120.000    3.000
 MST      C6     N1     C2      120.000    3.000
 MST      C6     N5     C4      120.000    3.000
 MST      N5     C4     N9      120.000    3.000
 MST      N5     C4     N3      120.000    3.000
 MST      N9     C4     N3      120.000    3.000
 MST      C4     N9     H9      120.000    3.000
 MST      C4     N9     C10     120.000    3.000
 MST      H9     N9     C10     118.500    3.000
 MST      N9     C10    C13     110.000    3.000
 MST      N9     C10    C12     110.000    3.000
 MST      N9     C10    C11     110.000    3.000
 MST      C13    C10    C12     111.000    3.000
 MST      C13    C10    C11     111.000    3.000
 MST      C12    C10    C11     111.000    3.000
 MST      C10    C13    H131    109.470    3.000
 MST      C10    C13    H132    109.470    3.000
 MST      C10    C13    H133    109.470    3.000
 MST      H131   C13    H132    109.470    3.000
 MST      H131   C13    H133    109.470    3.000
 MST      H132   C13    H133    109.470    3.000
 MST      C10    C12    H121    109.470    3.000
 MST      C10    C12    H122    109.470    3.000
 MST      C10    C12    H123    109.470    3.000
 MST      H121   C12    H122    109.470    3.000
 MST      H121   C12    H123    109.470    3.000
 MST      H122   C12    H123    109.470    3.000
 MST      C10    C11    H111    109.470    3.000
 MST      C10    C11    H112    109.470    3.000
 MST      C10    C11    H113    109.470    3.000
 MST      H111   C11    H112    109.470    3.000
 MST      H111   C11    H113    109.470    3.000
 MST      H112   C11    H113    109.470    3.000
 MST      C4     N3     C2      120.000    3.000
 MST      N3     C2     S7      120.000    3.000
 MST      N3     C2     N1      120.000    3.000
 MST      S7     C2     N1      120.000    3.000
 MST      C2     S7     C8      100.003    3.000
 MST      S7     C8     H81     109.500    3.000
 MST      S7     C8     H82     109.500    3.000
 MST      S7     C8     H83     109.500    3.000
 MST      H81    C8     H82     109.470    3.000
 MST      H81    C8     H83     109.470    3.000
 MST      H82    C8     H83     109.470    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 MST      var_1    H161   C16    C15    N14       59.971   20.000   3
 MST      var_2    C16    C15    N14    C6       180.000   20.000   3
 MST      var_3    C15    N14    C6     N5       180.000   20.000   1
 MST      CONST_1  N14    C6     N1     C2       180.000    0.000   0
 MST      CONST_2  C6     N1     C2     N3         0.000    0.000   0
 MST      CONST_3  N14    C6     N5     C4       180.000    0.000   0
 MST      CONST_4  C6     N5     C4     N3         0.000    0.000   0
 MST      var_4    N5     C4     N9     C10      180.000   20.000   1
 MST      var_5    C4     N9     C10    C11      180.000   20.000   1
 MST      var_6    N9     C10    C13    H133      59.942   20.000   1
 MST      var_7    N9     C10    C12    H123     -59.971   20.000   1
 MST      var_8    N9     C10    C11    H113     180.000   20.000   1
 MST      CONST_5  N5     C4     N3     C2         0.000    0.000   0
 MST      CONST_6  C4     N3     C2     S7       180.000    0.000   0
 MST      var_9    N3     C2     S7     C8       180.000   20.000   1
 MST      var_10   C2     S7     C8     H83      180.000   20.000   1
loop_
_chem_comp_chir.comp_id
_chem_comp_chir.id
_chem_comp_chir.atom_id_centre
_chem_comp_chir.atom_id_1
_chem_comp_chir.atom_id_2
_chem_comp_chir.atom_id_3
_chem_comp_chir.volume_sign
 MST      chir_01  C10    N9     C11    C12       negativ
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 MST      plan-1    N1        0.020
 MST      plan-1    C2        0.020
 MST      plan-1    C6        0.020
 MST      plan-1    N3        0.020
 MST      plan-1    C4        0.020
 MST      plan-1    N5        0.020
 MST      plan-1    S7        0.020
 MST      plan-1    N9        0.020
 MST      plan-1    N14       0.020
 MST      plan-1    H9        0.020
 MST      plan-1    H14       0.020
 MST      plan-2    N9        0.020
 MST      plan-2    C4        0.020
 MST      plan-2    C10       0.020
 MST      plan-2    H9        0.020
 MST      plan-3    N14       0.020
 MST      plan-3    C6        0.020
 MST      plan-3    C15       0.020
 MST      plan-3    H14       0.020
# ------------------------------------------------------