File: MUP.cif

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global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
MUP      MUP 'METHOXYUNDECYLPHOSPHINIC ACID       ' non-polymer        43  16 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_MUP
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 MUP           O1P    O    O         0.000      0.000    0.000    0.000
 MUP           P      P    P         0.000     -0.622    1.184   -0.634
 MUP           O3P    O    OH1       0.000     -0.506    2.447    0.356
 MUP           HOP3   H    H         0.000     -0.865    3.304    0.091
 MUP           O2P    O    O2        0.000      0.139    1.513   -2.014
 MUP           CM     C    CH3       0.000      1.504    1.775   -1.681
 MUP           HM3    H    H         0.000      1.554    2.600   -1.019
 MUP           HM2    H    H         0.000      1.923    0.922   -1.214
 MUP           HM1    H    H         0.000      2.046    1.997   -2.564
 MUP           C1     C    CH2       0.000     -2.378    0.838   -0.975
 MUP           H11    H    H         0.000     -2.455   -0.019   -1.648
 MUP           H12    H    H         0.000     -2.835    1.711   -1.446
 MUP           C2     C    CH2       0.000     -3.102    0.525    0.336
 MUP           H21    H    H         0.000     -3.022    1.383    1.007
 MUP           H22    H    H         0.000     -2.642   -0.347    0.805
 MUP           C3     C    CH2       0.000     -4.576    0.234    0.050
 MUP           H31    H    H         0.000     -4.653   -0.622   -0.623
 MUP           H32    H    H         0.000     -5.034    1.107   -0.420
 MUP           C4     C    CH2       0.000     -5.297   -0.078    1.361
 MUP           H41    H    H         0.000     -5.218    0.779    2.032
 MUP           H42    H    H         0.000     -4.837   -0.951    1.829
 MUP           C5     C    CH2       0.000     -6.772   -0.369    1.075
 MUP           H51    H    H         0.000     -6.849   -1.226    0.403
 MUP           H52    H    H         0.000     -7.230    0.503    0.604
 MUP           C6     C    CH2       0.000     -7.495   -0.682    2.386
 MUP           H61    H    H         0.000     -7.415    0.176    3.057
 MUP           H62    H    H         0.000     -7.035   -1.554    2.856
 MUP           C7     C    CH2       0.000     -8.969   -0.972    2.100
 MUP           H71    H    H         0.000     -9.045   -1.829    1.427
 MUP           H72    H    H         0.000     -9.426   -0.099    1.630
 MUP           C8     C    CH2       0.000     -9.691   -1.285    3.410
 MUP           H81    H    H         0.000     -9.612   -0.428    4.082
 MUP           H82    H    H         0.000     -9.231   -2.158    3.879
 MUP           C9     C    CH2       0.000    -11.166   -1.577    3.125
 MUP           H91    H    H         0.000    -11.243   -2.434    2.452
 MUP           H92    H    H         0.000    -11.624   -0.704    2.654
 MUP           C10    C    CH2       0.000    -11.889   -1.889    4.436
 MUP           H101   H    H         0.000    -11.809   -1.031    5.107
 MUP           H102   H    H         0.000    -11.429   -2.761    4.906
 MUP           C11    C    CH3       0.000    -13.363   -2.180    4.151
 MUP           H113   H    H         0.000    -13.813   -1.334    3.695
 MUP           H112   H    H         0.000    -13.443   -3.012    3.498
 MUP           H111   H    H         0.000    -13.867   -2.397    5.058
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 MUP      O1P    n/a    P      START
 MUP      P      O1P    C1     .
 MUP      O3P    P      HOP3   .
 MUP      HOP3   O3P    .      .
 MUP      O2P    P      CM     .
 MUP      CM     O2P    HM1    .
 MUP      HM3    CM     .      .
 MUP      HM2    CM     .      .
 MUP      HM1    CM     .      .
 MUP      C1     P      C2     .
 MUP      H11    C1     .      .
 MUP      H12    C1     .      .
 MUP      C2     C1     C3     .
 MUP      H21    C2     .      .
 MUP      H22    C2     .      .
 MUP      C3     C2     C4     .
 MUP      H31    C3     .      .
 MUP      H32    C3     .      .
 MUP      C4     C3     C5     .
 MUP      H41    C4     .      .
 MUP      H42    C4     .      .
 MUP      C5     C4     C6     .
 MUP      H51    C5     .      .
 MUP      H52    C5     .      .
 MUP      C6     C5     C7     .
 MUP      H61    C6     .      .
 MUP      H62    C6     .      .
 MUP      C7     C6     C8     .
 MUP      H71    C7     .      .
 MUP      H72    C7     .      .
 MUP      C8     C7     C9     .
 MUP      H81    C8     .      .
 MUP      H82    C8     .      .
 MUP      C9     C8     C10    .
 MUP      H91    C9     .      .
 MUP      H92    C9     .      .
 MUP      C10    C9     C11    .
 MUP      H101   C10    .      .
 MUP      H102   C10    .      .
 MUP      C11    C10    H111   .
 MUP      H113   C11    .      .
 MUP      H112   C11    .      .
 MUP      H111   C11    .      END
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 MUP      C2     C1        single      1.524    0.020
 MUP      C1     P         single      1.812    0.020
 MUP      H11    C1        single      1.092    0.020
 MUP      H12    C1        single      1.092    0.020
 MUP      C3     C2        single      1.524    0.020
 MUP      H21    C2        single      1.092    0.020
 MUP      H22    C2        single      1.092    0.020
 MUP      C4     C3        single      1.524    0.020
 MUP      H31    C3        single      1.092    0.020
 MUP      H32    C3        single      1.092    0.020
 MUP      C5     C4        single      1.524    0.020
 MUP      H41    C4        single      1.092    0.020
 MUP      H42    C4        single      1.092    0.020
 MUP      C6     C5        single      1.524    0.020
 MUP      H51    C5        single      1.092    0.020
 MUP      H52    C5        single      1.092    0.020
 MUP      C7     C6        single      1.524    0.020
 MUP      H61    C6        single      1.092    0.020
 MUP      H62    C6        single      1.092    0.020
 MUP      C8     C7        single      1.524    0.020
 MUP      H71    C7        single      1.092    0.020
 MUP      H72    C7        single      1.092    0.020
 MUP      C9     C8        single      1.524    0.020
 MUP      H81    C8        single      1.092    0.020
 MUP      H82    C8        single      1.092    0.020
 MUP      C10    C9        single      1.524    0.020
 MUP      H91    C9        single      1.092    0.020
 MUP      H92    C9        single      1.092    0.020
 MUP      C11    C10       single      1.513    0.020
 MUP      H101   C10       single      1.092    0.020
 MUP      H102   C10       single      1.092    0.020
 MUP      H111   C11       single      1.059    0.020
 MUP      H112   C11       single      1.059    0.020
 MUP      H113   C11       single      1.059    0.020
 MUP      CM     O2P       single      1.426    0.020
 MUP      HM1    CM        single      1.059    0.020
 MUP      HM2    CM        single      1.059    0.020
 MUP      HM3    CM        single      1.059    0.020
 MUP      P      O1P       double      1.480    0.020
 MUP      O2P    P         single      1.610    0.020
 MUP      O3P    P         single      1.610    0.020
 MUP      HOP3   O3P       single      0.967    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 MUP      O1P    P      O2P     109.500    3.000
 MUP      O1P    P      O3P     109.500    3.000
 MUP      O1P    P      C1      109.500    3.000
 MUP      O2P    P      O3P     109.500    3.000
 MUP      O2P    P      C1      109.500    3.000
 MUP      O3P    P      C1      109.500    3.000
 MUP      P      O2P    CM      120.000    3.000
 MUP      O2P    CM     HM3     109.470    3.000
 MUP      O2P    CM     HM2     109.470    3.000
 MUP      O2P    CM     HM1     109.470    3.000
 MUP      HM3    CM     HM2     109.470    3.000
 MUP      HM3    CM     HM1     109.470    3.000
 MUP      HM2    CM     HM1     109.470    3.000
 MUP      P      O3P    HOP3    120.000    3.000
 MUP      P      C1     H11     109.500    3.000
 MUP      P      C1     H12     109.500    3.000
 MUP      P      C1     C2      109.500    3.000
 MUP      H11    C1     H12     107.900    3.000
 MUP      H11    C1     C2      109.470    3.000
 MUP      H12    C1     C2      109.470    3.000
 MUP      C1     C2     H21     109.470    3.000
 MUP      C1     C2     H22     109.470    3.000
 MUP      C1     C2     C3      111.000    3.000
 MUP      H21    C2     H22     107.900    3.000
 MUP      H21    C2     C3      109.470    3.000
 MUP      H22    C2     C3      109.470    3.000
 MUP      C2     C3     H31     109.470    3.000
 MUP      C2     C3     H32     109.470    3.000
 MUP      C2     C3     C4      111.000    3.000
 MUP      H31    C3     H32     107.900    3.000
 MUP      H31    C3     C4      109.470    3.000
 MUP      H32    C3     C4      109.470    3.000
 MUP      C3     C4     H41     109.470    3.000
 MUP      C3     C4     H42     109.470    3.000
 MUP      C3     C4     C5      111.000    3.000
 MUP      H41    C4     H42     107.900    3.000
 MUP      H41    C4     C5      109.470    3.000
 MUP      H42    C4     C5      109.470    3.000
 MUP      C4     C5     H51     109.470    3.000
 MUP      C4     C5     H52     109.470    3.000
 MUP      C4     C5     C6      111.000    3.000
 MUP      H51    C5     H52     107.900    3.000
 MUP      H51    C5     C6      109.470    3.000
 MUP      H52    C5     C6      109.470    3.000
 MUP      C5     C6     H61     109.470    3.000
 MUP      C5     C6     H62     109.470    3.000
 MUP      C5     C6     C7      111.000    3.000
 MUP      H61    C6     H62     107.900    3.000
 MUP      H61    C6     C7      109.470    3.000
 MUP      H62    C6     C7      109.470    3.000
 MUP      C6     C7     H71     109.470    3.000
 MUP      C6     C7     H72     109.470    3.000
 MUP      C6     C7     C8      111.000    3.000
 MUP      H71    C7     H72     107.900    3.000
 MUP      H71    C7     C8      109.470    3.000
 MUP      H72    C7     C8      109.470    3.000
 MUP      C7     C8     H81     109.470    3.000
 MUP      C7     C8     H82     109.470    3.000
 MUP      C7     C8     C9      111.000    3.000
 MUP      H81    C8     H82     107.900    3.000
 MUP      H81    C8     C9      109.470    3.000
 MUP      H82    C8     C9      109.470    3.000
 MUP      C8     C9     H91     109.470    3.000
 MUP      C8     C9     H92     109.470    3.000
 MUP      C8     C9     C10     111.000    3.000
 MUP      H91    C9     H92     107.900    3.000
 MUP      H91    C9     C10     109.470    3.000
 MUP      H92    C9     C10     109.470    3.000
 MUP      C9     C10    H101    109.470    3.000
 MUP      C9     C10    H102    109.470    3.000
 MUP      C9     C10    C11     111.000    3.000
 MUP      H101   C10    H102    107.900    3.000
 MUP      H101   C10    C11     109.470    3.000
 MUP      H102   C10    C11     109.470    3.000
 MUP      C10    C11    H113    109.470    3.000
 MUP      C10    C11    H112    109.470    3.000
 MUP      C10    C11    H111    109.470    3.000
 MUP      H113   C11    H112    109.470    3.000
 MUP      H113   C11    H111    109.470    3.000
 MUP      H112   C11    H111    109.470    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 MUP      var_1    O1P    P      O2P    CM       -60.025   20.000   1
 MUP      var_2    P      O2P    CM     HM1      179.928   20.000   1
 MUP      var_3    O1P    P      O3P    HOP3     179.967   20.000   1
 MUP      var_4    O1P    P      C1     C2        60.078   20.000   1
 MUP      var_5    P      C1     C2     C3      -179.990   20.000   3
 MUP      var_6    C1     C2     C3     C4       179.966   20.000   3
 MUP      var_7    C2     C3     C4     C5      -180.000   20.000   3
 MUP      var_8    C3     C4     C5     C6      -179.961   20.000   3
 MUP      var_9    C4     C5     C6     C7       180.000   20.000   3
 MUP      var_10   C5     C6     C7     C8       179.956   20.000   3
 MUP      var_11   C6     C7     C8     C9      -180.000   20.000   3
 MUP      var_12   C7     C8     C9     C10     -179.956   20.000   3
 MUP      var_13   C8     C9     C10    C11      180.000   20.000   3
 MUP      var_14   C9     C10    C11    H111     179.969   20.000   3
# ------------------------------------------------------