File: NME.cif

package info (click to toggle)
refmac-dictionary 5.41-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 217,852 kB
file content (104 lines) | stat: -rw-r--r-- 3,374 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
NME      NME 'METHYLAMINE                         ' non-polymer         7   2 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_NME
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 NME           C      C    CH3       0.000      0.000    0.000    0.000
 NME           H1     H    H         0.000     -0.405   -0.847   -0.492
 NME           H2     H    H         0.000     -0.257   -0.034    1.027
 NME           H3     H    H         0.000     -0.399    0.881   -0.433
 NME           N      N    NH2       0.000      1.462    0.000   -0.142
 NME           HN2    H    H         0.000      1.928   -0.772   -0.600
 NME           HN1    H    H         0.000      2.007    0.772    0.218
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 NME      C      n/a    N      START
 NME      H1     C      .      .
 NME      H2     C      .      .
 NME      H3     C      .      .
 NME      N      C      HN1    .
 NME      HN2    N      .      .
 NME      HN1    N      .      END
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 NME      N      C         single      1.462    0.020
 NME      HN1    N         single      1.010    0.020
 NME      HN2    N         single      1.010    0.020
 NME      H1     C         single      1.059    0.020
 NME      H2     C         single      1.059    0.020
 NME      H3     C         single      1.059    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 NME      H1     C      H2      109.470    3.000
 NME      H1     C      H3      109.470    3.000
 NME      H2     C      H3      109.470    3.000
 NME      H1     C      N       109.500    3.000
 NME      H2     C      N       109.500    3.000
 NME      H3     C      N       109.500    3.000
 NME      C      N      HN2     120.000    3.000
 NME      C      N      HN1     120.000    3.000
 NME      HN2    N      HN1     120.000    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 NME      var_1    H3     C      N      HN1       56.059   20.000   1
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 NME      plan-1    N         0.020
 NME      plan-1    C         0.000
 NME      plan-1    HN1       0.000
 NME      plan-1    HN2       0.000
# ------------------------------------------------------