File: PRY.cif

package info (click to toggle)
refmac-dictionary 5.41-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 217,852 kB
file content (207 lines) | stat: -rw-r--r-- 8,609 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
PRY      PRY '2-PROPYL-ANILINE                    ' non-polymer        23  10 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_PRY
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 PRY           N6     N    NH2       0.000      0.000    0.000    0.000
 PRY           HN61   H    H         0.000      0.861    0.298    0.454
 PRY           HN62   H    H         0.000      0.030   -0.237   -0.990
 PRY           C2     C    CR6       0.000     -1.195   -0.083    0.718
 PRY           C5     C    CR16      0.000     -1.221    0.244    2.068
 PRY           HC5    H    H         0.000     -0.314    0.563    2.566
 PRY           C8     C    CR16      0.000     -2.403    0.161    2.775
 PRY           HC8    H    H         0.000     -2.423    0.411    3.828
 PRY           C7     C    CR16      0.000     -3.564   -0.242    2.138
 PRY           HC7    H    H         0.000     -4.491   -0.306    2.694
 PRY           C3     C    CR16      0.000     -3.543   -0.563    0.794
 PRY           HC3    H    H         0.000     -4.453   -0.879    0.299
 PRY           C1     C    CR6       0.000     -2.362   -0.481    0.080
 PRY           C4     C    CH2       0.000     -2.341   -0.831   -1.384
 PRY           HC41   H    H         0.000     -3.103   -1.586   -1.588
 PRY           HC42   H    H         0.000     -1.358   -1.227   -1.648
 PRY           C9     C    CH2       0.000     -2.628    0.422   -2.212
 PRY           HC91   H    H         0.000     -1.865    1.176   -2.006
 PRY           HC92   H    H         0.000     -3.610    0.817   -1.945
 PRY           C10    C    CH3       0.000     -2.606    0.066   -3.700
 PRY           H103   H    H         0.000     -1.653   -0.318   -3.961
 PRY           H102   H    H         0.000     -3.346   -0.666   -3.902
 PRY           H101   H    H         0.000     -2.804    0.933   -4.277
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 PRY      N6     n/a    C2     START
 PRY      HN61   N6     .      .
 PRY      HN62   N6     .      .
 PRY      C2     N6     C5     .
 PRY      C5     C2     C8     .
 PRY      HC5    C5     .      .
 PRY      C8     C5     C7     .
 PRY      HC8    C8     .      .
 PRY      C7     C8     C3     .
 PRY      HC7    C7     .      .
 PRY      C3     C7     C1     .
 PRY      HC3    C3     .      .
 PRY      C1     C3     C4     .
 PRY      C4     C1     C9     .
 PRY      HC41   C4     .      .
 PRY      HC42   C4     .      .
 PRY      C9     C4     C10    .
 PRY      HC91   C9     .      .
 PRY      HC92   C9     .      .
 PRY      C10    C9     H101   .
 PRY      H103   C10    .      .
 PRY      H102   C10    .      .
 PRY      H101   C10    .      END
 PRY      C1     C2     .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 PRY      C1     C2        double      1.487    0.020
 PRY      C1     C3        single      1.390    0.020
 PRY      C4     C1        single      1.511    0.020
 PRY      C5     C2        single      1.390    0.020
 PRY      C2     N6        single      1.355    0.020
 PRY      C3     C7        double      1.390    0.020
 PRY      HC3    C3        single      1.083    0.020
 PRY      C9     C4        single      1.524    0.020
 PRY      HC41   C4        single      1.092    0.020
 PRY      HC42   C4        single      1.092    0.020
 PRY      C8     C5        double      1.390    0.020
 PRY      HC5    C5        single      1.083    0.020
 PRY      HN61   N6        single      1.010    0.020
 PRY      HN62   N6        single      1.010    0.020
 PRY      C7     C8        single      1.390    0.020
 PRY      HC7    C7        single      1.083    0.020
 PRY      HC8    C8        single      1.083    0.020
 PRY      C10    C9        single      1.513    0.020
 PRY      HC91   C9        single      1.092    0.020
 PRY      HC92   C9        single      1.092    0.020
 PRY      H101   C10       single      1.059    0.020
 PRY      H102   C10       single      1.059    0.020
 PRY      H103   C10       single      1.059    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 PRY      HN61   N6     HN62    120.000    3.000
 PRY      HN61   N6     C2      120.000    3.000
 PRY      HN62   N6     C2      120.000    3.000
 PRY      N6     C2     C5      120.000    3.000
 PRY      N6     C2     C1      120.000    3.000
 PRY      C5     C2     C1      120.000    3.000
 PRY      C2     C5     HC5     120.000    3.000
 PRY      C2     C5     C8      120.000    3.000
 PRY      HC5    C5     C8      120.000    3.000
 PRY      C5     C8     HC8     120.000    3.000
 PRY      C5     C8     C7      120.000    3.000
 PRY      HC8    C8     C7      120.000    3.000
 PRY      C8     C7     HC7     120.000    3.000
 PRY      C8     C7     C3      120.000    3.000
 PRY      HC7    C7     C3      120.000    3.000
 PRY      C7     C3     HC3     120.000    3.000
 PRY      C7     C3     C1      120.000    3.000
 PRY      HC3    C3     C1      120.000    3.000
 PRY      C3     C1     C4      120.000    3.000
 PRY      C3     C1     C2      120.000    3.000
 PRY      C4     C1     C2      120.000    3.000
 PRY      C1     C4     HC41    109.470    3.000
 PRY      C1     C4     HC42    109.470    3.000
 PRY      C1     C4     C9      109.470    3.000
 PRY      HC41   C4     HC42    107.900    3.000
 PRY      HC41   C4     C9      109.470    3.000
 PRY      HC42   C4     C9      109.470    3.000
 PRY      C4     C9     HC91    109.470    3.000
 PRY      C4     C9     HC92    109.470    3.000
 PRY      C4     C9     C10     111.000    3.000
 PRY      HC91   C9     HC92    107.900    3.000
 PRY      HC91   C9     C10     109.470    3.000
 PRY      HC92   C9     C10     109.470    3.000
 PRY      C9     C10    H103    109.470    3.000
 PRY      C9     C10    H102    109.470    3.000
 PRY      C9     C10    H101    109.470    3.000
 PRY      H103   C10    H102    109.470    3.000
 PRY      H103   C10    H101    109.470    3.000
 PRY      H102   C10    H101    109.470    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 PRY      CONST_1  HN62   N6     C2     C5      -179.999    0.000   0
 PRY      CONST_2  N6     C2     C5     C8       180.000    0.000   0
 PRY      CONST_3  C2     C5     C8     C7         0.000    0.000   0
 PRY      CONST_4  C5     C8     C7     C3         0.000    0.000   0
 PRY      CONST_5  C8     C7     C3     C1         0.000    0.000   0
 PRY      CONST_6  C7     C3     C1     C4       180.000    0.000   0
 PRY      CONST_7  C3     C1     C2     N6       180.000    0.000   0
 PRY      var_1    C3     C1     C4     C9        90.067   20.000   2
 PRY      var_2    C1     C4     C9     C10     -179.980   20.000   3
 PRY      var_3    C4     C9     C10    H101    -179.983   20.000   3
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 PRY      plan-1    C1        0.020
 PRY      plan-1    C2        0.020
 PRY      plan-1    C3        0.020
 PRY      plan-1    C4        0.020
 PRY      plan-1    C5        0.020
 PRY      plan-1    C7        0.020
 PRY      plan-1    C8        0.020
 PRY      plan-1    N6        0.020
 PRY      plan-1    HC3       0.020
 PRY      plan-1    HC5       0.020
 PRY      plan-1    HC7       0.020
 PRY      plan-1    HC8       0.020
 PRY      plan-1    HN61      0.020
 PRY      plan-1    HN62      0.020
 PRY      plan-2    N6        0.020
 PRY      plan-2    C2        0.020
 PRY      plan-2    HN61      0.020
 PRY      plan-2    HN62      0.020
# ------------------------------------------------------