File: REF.cif

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global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
REF      REF '2,3,7,8-tetrahydroxychromeno[5,4,3-c' non-polymer        28  22 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_REF
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 REF           O24    O    O        -0.500      0.000    0.000    0.000
 REF           C6     C    CR6       0.000     -1.126   -0.045    0.543
 REF           O5     O    O2       -0.500     -1.251   -0.488    1.707
 REF           C1     C    CR66      0.000     -2.320    0.420   -0.179
 REF           C14    C    CR16      0.000     -2.299    1.305   -1.249
 REF           H14    H    H         0.000     -1.363    1.728   -1.593
 REF           C15    C    CR6       0.000     -3.493    1.639   -1.872
 REF           O23    O    OH1       0.000     -3.470    2.500   -2.925
 REF           HO23   H    H         0.000     -3.363    2.002   -3.746
 REF           C16    C    CR6       0.000     -4.715    1.116   -1.448
 REF           O22    O    OH1       0.000     -5.860    1.462   -2.092
 REF           HO22   H    H         0.000     -6.237    2.250   -1.677
 REF           C11    C    CR66      0.000     -4.763    0.241   -0.368
 REF           C2     C    CR66      0.000     -3.561   -0.096    0.251
 REF           O12    O    O2       -0.500     -5.926   -0.353    0.159
 REF           C13    C    CR6       0.000     -5.900   -1.419    0.813
 REF           O21    O    O        -0.500     -6.837   -2.243    0.720
 REF           C7     C    CR66      0.000     -4.754   -1.691    1.695
 REF           C3     C    CR66      0.000     -3.550   -1.019    1.392
 REF           C8     C    CR16      0.000     -4.777   -2.568    2.772
 REF           H8     H    H         0.000     -5.689   -3.087    3.037
 REF           C9     C    CR6       0.000     -3.616   -2.769    3.504
 REF           O20    O    OH1       0.000     -3.637   -3.632    4.555
 REF           HO20   H    H         0.000     -3.410   -4.520    4.247
 REF           C10    C    CR6       0.000     -2.426   -2.110    3.191
 REF           C4     C    CR66      0.000     -2.382   -1.215    2.125
 REF           O19    O    OH1       0.000     -1.309   -2.342    3.927
 REF           HO19   H    H         0.000     -1.273   -1.717    4.663
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 REF      O24    n/a    C6     START
 REF      C6     O24    C1     .
 REF      O5     C6     .      .
 REF      C1     C6     C14    .
 REF      C14    C1     C15    .
 REF      H14    C14    .      .
 REF      C15    C14    C16    .
 REF      O23    C15    HO23   .
 REF      HO23   O23    .      .
 REF      C16    C15    C11    .
 REF      O22    C16    HO22   .
 REF      HO22   O22    .      .
 REF      C11    C16    O12    .
 REF      C2     C11    .      .
 REF      O12    C11    C13    .
 REF      C13    O12    C7     .
 REF      O21    C13    .      .
 REF      C7     C13    C8     .
 REF      C3     C7     .      .
 REF      C8     C7     C9     .
 REF      H8     C8     .      .
 REF      C9     C8     C10    .
 REF      O20    C9     HO20   .
 REF      HO20   O20    .      .
 REF      C10    C9     O19    .
 REF      C4     C10    .      .
 REF      O19    C10    HO19   .
 REF      HO19   O19    .      END
 REF      C1     C2     .    ADD
 REF      C2     C3     .    ADD
 REF      C3     C4     .    ADD
 REF      C4     O5     .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 REF      C1     C2        double      1.490    0.020
 REF      C1     C6        single      1.490    0.020
 REF      C14    C1        single      1.390    0.020
 REF      C2     C3        single      1.490    0.020
 REF      C2     C11       single      1.490    0.020
 REF      C3     C4        double      1.490    0.020
 REF      C3     C7        single      1.490    0.020
 REF      C4     O5        single      1.370    0.020
 REF      C4     C10       single      1.490    0.020
 REF      O5     C6        deloc       1.370    0.020
 REF      C6     O24       deloc       1.250    0.020
 REF      C8     C7        double      1.390    0.020
 REF      C7     C13       single      1.490    0.020
 REF      C9     C8        single      1.390    0.020
 REF      C10    C9        double      1.487    0.020
 REF      O20    C9        single      1.362    0.020
 REF      O19    C10       single      1.362    0.020
 REF      O12    C11       single      1.370    0.020
 REF      C11    C16       double      1.490    0.020
 REF      C13    O12       deloc       1.370    0.020
 REF      O21    C13       deloc       1.250    0.020
 REF      C15    C14       double      1.390    0.020
 REF      C16    C15       single      1.487    0.020
 REF      O23    C15       single      1.362    0.020
 REF      O22    C16       single      1.362    0.020
 REF      H8     C8        single      1.083    0.020
 REF      H14    C14       single      1.083    0.020
 REF      HO19   O19       single      0.967    0.020
 REF      HO20   O20       single      0.967    0.020
 REF      HO22   O22       single      0.967    0.020
 REF      HO23   O23       single      0.967    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 REF      O24    C6     O5      120.000    3.000
 REF      O24    C6     C1      120.000    3.000
 REF      O5     C6     C1      120.000    3.000
 REF      C6     O5     C4      120.000    3.000
 REF      C6     C1     C14     120.000    3.000
 REF      C6     C1     C2      120.000    3.000
 REF      C14    C1     C2      120.000    3.000
 REF      C1     C14    H14     120.000    3.000
 REF      C1     C14    C15     120.000    3.000
 REF      H14    C14    C15     120.000    3.000
 REF      C14    C15    O23     120.000    3.000
 REF      C14    C15    C16     120.000    3.000
 REF      O23    C15    C16     120.000    3.000
 REF      C15    O23    HO23    109.470    3.000
 REF      C15    C16    O22     120.000    3.000
 REF      C15    C16    C11     120.000    3.000
 REF      O22    C16    C11     120.000    3.000
 REF      C16    O22    HO22    109.470    3.000
 REF      C16    C11    C2      120.000    3.000
 REF      C16    C11    O12     120.000    3.000
 REF      C2     C11    O12     120.000    3.000
 REF      C11    C2     C1      120.000    3.000
 REF      C11    C2     C3      120.000    3.000
 REF      C1     C2     C3      120.000    3.000
 REF      C11    O12    C13     120.000    3.000
 REF      O12    C13    O21     120.000    3.000
 REF      O12    C13    C7      120.000    3.000
 REF      O21    C13    C7      120.000    3.000
 REF      C13    C7     C3      120.000    3.000
 REF      C13    C7     C8      120.000    3.000
 REF      C3     C7     C8      120.000    3.000
 REF      C7     C3     C2      120.000    3.000
 REF      C7     C3     C4      120.000    3.000
 REF      C2     C3     C4      120.000    3.000
 REF      C7     C8     H8      120.000    3.000
 REF      C7     C8     C9      120.000    3.000
 REF      H8     C8     C9      120.000    3.000
 REF      C8     C9     O20     120.000    3.000
 REF      C8     C9     C10     120.000    3.000
 REF      O20    C9     C10     120.000    3.000
 REF      C9     O20    HO20    109.470    3.000
 REF      C9     C10    C4      120.000    3.000
 REF      C9     C10    O19     120.000    3.000
 REF      C4     C10    O19     120.000    3.000
 REF      C10    C4     C3      120.000    3.000
 REF      C10    C4     O5      120.000    3.000
 REF      C3     C4     O5      120.000    3.000
 REF      C10    O19    HO19    109.470    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 REF      CONST_1  O24    C6     O5     C4      -150.000    0.000   0
 REF      CONST_2  O24    C6     C1     C14      -30.000    0.000   0
 REF      CONST_3  C6     C1     C2     C11      180.000    0.000   0
 REF      CONST_4  C6     C1     C14    C15      180.000    0.000   0
 REF      CONST_5  C1     C14    C15    C16        0.000    0.000   0
 REF      var_1    C14    C15    O23    HO23      89.974   20.000   1
 REF      CONST_6  C14    C15    C16    C11        0.000    0.000   0
 REF      var_2    C15    C16    O22    HO22     -89.999   20.000   1
 REF      CONST_7  C15    C16    C11    O12      180.000    0.000   0
 REF      CONST_8  C16    C11    C2     C1         0.000    0.000   0
 REF      CONST_9  C11    C2     C3     C7         0.000    0.000   0
 REF      CONST_10 C16    C11    O12    C13      150.000    0.000   0
 REF      CONST_11 C11    O12    C13    C7        30.000    0.000   0
 REF      CONST_12 O12    C13    C7     C8       150.000    0.000   0
 REF      CONST_13 C13    C7     C3     C2         0.000    0.000   0
 REF      CONST_14 C7     C3     C4     C10        0.000    0.000   0
 REF      CONST_15 C13    C7     C8     C9       180.000    0.000   0
 REF      CONST_16 C7     C8     C9     C10        0.000    0.000   0
 REF      var_3    C8     C9     O20    HO20      89.970   20.000   1
 REF      CONST_17 C8     C9     C10    O19      180.000    0.000   0
 REF      CONST_18 C9     C10    C4     C3         0.000    0.000   0
 REF      CONST_19 C10    C4     O5     C6       150.000    0.000   0
 REF      var_4    C9     C10    O19    HO19     -90.042   20.000   1
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 REF      plan-1    C1        0.020
 REF      plan-1    C2        0.020
 REF      plan-1    C6        0.020
 REF      plan-1    C14       0.020
 REF      plan-1    C15       0.020
 REF      plan-1    C16       0.020
 REF      plan-1    C3        0.020
 REF      plan-1    C11       0.020
 REF      plan-1    O12       0.020
 REF      plan-1    C13       0.020
 REF      plan-1    C4        0.020
 REF      plan-1    C7        0.020
 REF      plan-1    C8        0.020
 REF      plan-1    C9        0.020
 REF      plan-1    C10       0.020
 REF      plan-1    O5        0.020
 REF      plan-1    O24       0.020
 REF      plan-1    H8        0.020
 REF      plan-1    O20       0.020
 REF      plan-1    O19       0.020
 REF      plan-1    O21       0.020
 REF      plan-1    H14       0.020
 REF      plan-1    O23       0.020
 REF      plan-1    O22       0.020
# ------------------------------------------------------