File: TCC.cif

package info (click to toggle)
refmac-dictionary 5.41-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 217,852 kB
file content (233 lines) | stat: -rw-r--r-- 9,845 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
TCC      TCC '2-(2,4-DICHLORO-PHENYLAMINO)-PHENOL ' non-polymer        25  16 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_TCC
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 TCC           CL1    CL   CL        0.000      0.000    0.000    0.000
 TCC           C9     C    CR6       0.000     -1.535   -0.245   -0.772
 TCC           C10    C    CR16      0.000     -1.648   -0.116   -2.144
 TCC           H10C   H    H         0.000     -0.778    0.138   -2.737
 TCC           C11    C    CR6       0.000     -2.871   -0.311   -2.760
 TCC           CL2    CL   CL        0.000     -3.010   -0.141   -4.482
 TCC           C8     C    CR6       0.000     -2.650   -0.582   -0.014
 TCC           C7     C    CR16      0.000     -3.876   -0.776   -0.635
 TCC           HC7    H    H         0.000     -4.747   -1.035   -0.046
 TCC           C12    C    CR16      0.000     -3.983   -0.641   -2.006
 TCC           H12C   H    H         0.000     -4.939   -0.793   -2.491
 TCC           N1     N    NH1       0.000     -2.537   -0.718    1.372
 TCC           HN1    H    H         0.000     -1.757   -1.223    1.768
 TCC           C4     C    CR6       0.000     -3.504   -0.155    2.211
 TCC           C3     C    CR6       0.000     -3.487   -0.424    3.578
 TCC           O1     O    OH1       0.000     -2.526   -1.231    4.101
 TCC           HO1    H    H         0.000     -2.836   -2.147    4.093
 TCC           C2     C    CR16      0.000     -4.446    0.136    4.404
 TCC           HC2    H    H         0.000     -4.431   -0.068    5.468
 TCC           C1     C    CR16      0.000     -5.423    0.957    3.872
 TCC           HC1    H    H         0.000     -6.173    1.395    4.519
 TCC           C6     C    CR16      0.000     -5.446    1.220    2.514
 TCC           HC6    H    H         0.000     -6.213    1.863    2.102
 TCC           C5     C    CR16      0.000     -4.492    0.664    1.683
 TCC           HC5    H    H         0.000     -4.515    0.868    0.620
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 TCC      CL1    n/a    C9     START
 TCC      C9     CL1    C8     .
 TCC      C10    C9     C11    .
 TCC      H10C   C10    .      .
 TCC      C11    C10    CL2    .
 TCC      CL2    C11    .      .
 TCC      C8     C9     N1     .
 TCC      C7     C8     C12    .
 TCC      HC7    C7     .      .
 TCC      C12    C7     H12C   .
 TCC      H12C   C12    .      .
 TCC      N1     C8     C4     .
 TCC      HN1    N1     .      .
 TCC      C4     N1     C3     .
 TCC      C3     C4     C2     .
 TCC      O1     C3     HO1    .
 TCC      HO1    O1     .      .
 TCC      C2     C3     C1     .
 TCC      HC2    C2     .      .
 TCC      C1     C2     C6     .
 TCC      HC1    C1     .      .
 TCC      C6     C1     C5     .
 TCC      HC6    C6     .      .
 TCC      C5     C6     HC5    .
 TCC      HC5    C5     .      END
 TCC      C12    C11    .    ADD
 TCC      C4     C5     .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 TCC      C12    C11       double      1.390    0.020
 TCC      C12    C7        single      1.390    0.020
 TCC      H12C   C12       single      1.083    0.020
 TCC      CL2    C11       single      1.795    0.020
 TCC      C11    C10       single      1.390    0.020
 TCC      C10    C9        double      1.390    0.020
 TCC      H10C   C10       single      1.083    0.020
 TCC      C9     CL1       single      1.795    0.020
 TCC      C8     C9        single      1.487    0.020
 TCC      N1     C8        single      1.350    0.020
 TCC      C7     C8        double      1.390    0.020
 TCC      C4     N1        single      1.350    0.020
 TCC      HN1    N1        single      1.010    0.020
 TCC      C4     C5        double      1.390    0.020
 TCC      C3     C4        single      1.487    0.020
 TCC      C5     C6        single      1.390    0.020
 TCC      HC5    C5        single      1.083    0.020
 TCC      C6     C1        double      1.390    0.020
 TCC      HC6    C6        single      1.083    0.020
 TCC      C1     C2        single      1.390    0.020
 TCC      HC1    C1        single      1.083    0.020
 TCC      C2     C3        double      1.390    0.020
 TCC      HC2    C2        single      1.083    0.020
 TCC      O1     C3        single      1.362    0.020
 TCC      HO1    O1        single      0.967    0.020
 TCC      HC7    C7        single      1.083    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 TCC      CL1    C9     C10     120.000    3.000
 TCC      CL1    C9     C8      120.000    3.000
 TCC      C10    C9     C8      120.000    3.000
 TCC      C9     C10    H10C    120.000    3.000
 TCC      C9     C10    C11     120.000    3.000
 TCC      H10C   C10    C11     120.000    3.000
 TCC      C10    C11    CL2     120.000    3.000
 TCC      C10    C11    C12     120.000    3.000
 TCC      CL2    C11    C12     120.000    3.000
 TCC      C9     C8     C7      120.000    3.000
 TCC      C9     C8     N1      120.000    3.000
 TCC      C7     C8     N1      120.000    3.000
 TCC      C8     C7     HC7     120.000    3.000
 TCC      C8     C7     C12     120.000    3.000
 TCC      HC7    C7     C12     120.000    3.000
 TCC      C7     C12    H12C    120.000    3.000
 TCC      C7     C12    C11     120.000    3.000
 TCC      H12C   C12    C11     120.000    3.000
 TCC      C8     N1     HN1     120.000    3.000
 TCC      C8     N1     C4      120.000    3.000
 TCC      HN1    N1     C4      120.000    3.000
 TCC      N1     C4     C3      120.000    3.000
 TCC      N1     C4     C5      120.000    3.000
 TCC      C3     C4     C5      120.000    3.000
 TCC      C4     C3     O1      120.000    3.000
 TCC      C4     C3     C2      120.000    3.000
 TCC      O1     C3     C2      120.000    3.000
 TCC      C3     O1     HO1     109.470    3.000
 TCC      C3     C2     HC2     120.000    3.000
 TCC      C3     C2     C1      120.000    3.000
 TCC      HC2    C2     C1      120.000    3.000
 TCC      C2     C1     HC1     120.000    3.000
 TCC      C2     C1     C6      120.000    3.000
 TCC      HC1    C1     C6      120.000    3.000
 TCC      C1     C6     HC6     120.000    3.000
 TCC      C1     C6     C5      120.000    3.000
 TCC      HC6    C6     C5      120.000    3.000
 TCC      C6     C5     HC5     120.000    3.000
 TCC      C6     C5     C4      120.000    3.000
 TCC      HC5    C5     C4      120.000    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 TCC      CONST_1  CL1    C9     C10    C11      180.000    0.000   0
 TCC      CONST_2  C9     C10    C11    CL2      180.000    0.000   0
 TCC      CONST_3  CL1    C9     C8     N1         0.000    0.000   0
 TCC      CONST_4  C9     C8     C7     C12        0.000    0.000   0
 TCC      CONST_5  C8     C7     C12    C11        0.000    0.000   0
 TCC      CONST_6  C7     C12    C11    C10        0.000    0.000   0
 TCC      var_1    C9     C8     N1     C4       135.447   20.000   1
 TCC      var_2    C8     N1     C4     C3       172.187   20.000   1
 TCC      CONST_7  N1     C4     C5     C6       180.000    0.000   0
 TCC      CONST_8  N1     C4     C3     C2       180.000    0.000   0
 TCC      var_3    C4     C3     O1     HO1      -90.306   20.000   1
 TCC      CONST_9  C4     C3     C2     C1         0.000    0.000   0
 TCC      CONST_10 C3     C2     C1     C6         0.000    0.000   0
 TCC      CONST_11 C2     C1     C6     C5         0.000    0.000   0
 TCC      CONST_12 C1     C6     C5     C4         0.000    0.000   0
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 TCC      plan-1    C12       0.020
 TCC      plan-1    C11       0.020
 TCC      plan-1    C7        0.020
 TCC      plan-1    H12C      0.020
 TCC      plan-1    C10       0.020
 TCC      plan-1    C9        0.020
 TCC      plan-1    C8        0.020
 TCC      plan-1    CL2       0.020
 TCC      plan-1    H10C      0.020
 TCC      plan-1    CL1       0.020
 TCC      plan-1    N1        0.020
 TCC      plan-1    HC7       0.020
 TCC      plan-1    HN1       0.020
 TCC      plan-2    N1        0.020
 TCC      plan-2    C8        0.020
 TCC      plan-2    C4        0.020
 TCC      plan-2    HN1       0.020
 TCC      plan-3    C4        0.020
 TCC      plan-3    N1        0.020
 TCC      plan-3    C5        0.020
 TCC      plan-3    C3        0.020
 TCC      plan-3    C6        0.020
 TCC      plan-3    C1        0.020
 TCC      plan-3    C2        0.020
 TCC      plan-3    HC5       0.020
 TCC      plan-3    HC6       0.020
 TCC      plan-3    HC1       0.020
 TCC      plan-3    HC2       0.020
 TCC      plan-3    O1        0.020
 TCC      plan-3    HN1       0.020
# ------------------------------------------------------