File: TDB.cif

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global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
TDB      TDB '6-METHYL-2(PROPANE-1-SULFONYL)-2H-TH' non-polymer        30  17 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_TDB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 TDB           O16    O    OS        0.000      0.000    0.000    0.000
 TDB           S15    S    ST        0.000     -1.018   -0.429    0.893
 TDB           O15    O    OS        0.000     -1.239    0.205    2.145
 TDB           C15    C    CH2       0.000     -1.061   -2.235    1.042
 TDB           H151   H    H         0.000     -1.072   -2.681    0.046
 TDB           H152   H    H         0.000     -1.961   -2.533    1.584
 TDB           C16    C    CH2       0.000      0.177   -2.713    1.804
 TDB           H161   H    H         0.000      0.187   -2.265    2.799
 TDB           H162   H    H         0.000      1.076   -2.412    1.262
 TDB           C17    C    CH3       0.000      0.142   -4.238    1.929
 TDB           H173   H    H         0.000     -0.730   -4.532    2.455
 TDB           H172   H    H         0.000      0.132   -4.675    0.963
 TDB           H171   H    H         0.000      0.998   -4.573    2.456
 TDB           N1     N    NR6       0.000     -2.407   -0.086    0.058
 TDB           N2     N    NRD6      0.000     -3.604    0.160    0.744
 TDB           C2     C    CR16      0.000     -4.695    0.431    0.090
 TDB           H2     H    H         0.000     -5.603    0.618    0.650
 TDB           C14    C    CR56      0.000     -4.744    0.490   -1.302
 TDB           S1     S    S2        0.000     -6.046    0.824   -2.467
 TDB           B1     B    B         0.000     -2.396   -0.030   -1.452
 TDB           O1     O    OH1       0.000     -1.203   -0.267   -2.184
 TDB           HO1    H    H         0.000     -1.244   -0.224   -3.131
 TDB           C13    C    CR56      0.000     -3.632    0.267   -2.127
 TDB           C12    C    CR15      0.000     -3.865    0.367   -3.508
 TDB           H12    H    H         0.000     -3.052    0.207   -4.205
 TDB           C7     C    CR5       0.000     -5.095    0.662   -3.967
 TDB           C8     C    CH3       0.000     -5.555    0.816   -5.393
 TDB           H83    H    H         0.000     -5.010    1.596   -5.858
 TDB           H82    H    H         0.000     -5.391   -0.090   -5.917
 TDB           H81    H    H         0.000     -6.588    1.049   -5.408
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 TDB      O16    n/a    S15    START
 TDB      S15    O16    N1     .
 TDB      O15    S15    .      .
 TDB      C15    S15    C16    .
 TDB      H151   C15    .      .
 TDB      H152   C15    .      .
 TDB      C16    C15    C17    .
 TDB      H161   C16    .      .
 TDB      H162   C16    .      .
 TDB      C17    C16    H171   .
 TDB      H173   C17    .      .
 TDB      H172   C17    .      .
 TDB      H171   C17    .      .
 TDB      N1     S15    B1     .
 TDB      N2     N1     C2     .
 TDB      C2     N2     C14    .
 TDB      H2     C2     .      .
 TDB      C14    C2     S1     .
 TDB      S1     C14    .      .
 TDB      B1     N1     C13    .
 TDB      O1     B1     HO1    .
 TDB      HO1    O1     .      .
 TDB      C13    B1     C12    .
 TDB      C12    C13    C7     .
 TDB      H12    C12    .      .
 TDB      C7     C12    C8     .
 TDB      C8     C7     H81    .
 TDB      H83    C8     .      .
 TDB      H82    C8     .      .
 TDB      H81    C8     .      END
 TDB      S1     C7     .    ADD
 TDB      C13    C14    .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 TDB      S1     C7        single      1.745    0.020
 TDB      S1     C14       single      1.695    0.020
 TDB      C8     C7        single      1.506    0.020
 TDB      C7     C12       double      1.387    0.020
 TDB      H81    C8        single      1.059    0.020
 TDB      H82    C8        single      1.059    0.020
 TDB      H83    C8        single      1.059    0.020
 TDB      C12    C13       single      1.440    0.020
 TDB      H12    C12       single      1.083    0.020
 TDB      C13    C14       double      1.490    0.020
 TDB      C13    B1        single      1.495    0.020
 TDB      C14    C2        single      1.390    0.020
 TDB      C2     N2        double      1.337    0.020
 TDB      H2     C2        single      1.083    0.020
 TDB      N2     N1        single      1.400    0.020
 TDB      B1     N1        single      1.500    0.020
 TDB      N1     S15       single      1.600    0.020
 TDB      O1     B1        single      1.535    0.020
 TDB      HO1    O1        single      0.967    0.020
 TDB      O15    S15       double      1.436    0.020
 TDB      S15    O16       double      1.436    0.020
 TDB      C15    S15       single      1.662    0.020
 TDB      C16    C15       single      1.524    0.020
 TDB      H151   C15       single      1.092    0.020
 TDB      H152   C15       single      1.092    0.020
 TDB      C17    C16       single      1.513    0.020
 TDB      H161   C16       single      1.092    0.020
 TDB      H162   C16       single      1.092    0.020
 TDB      H171   C17       single      1.059    0.020
 TDB      H172   C17       single      1.059    0.020
 TDB      H173   C17       single      1.059    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 TDB      O16    S15    O15     109.500    3.000
 TDB      O16    S15    C15     109.500    3.000
 TDB      O16    S15    N1      109.500    3.000
 TDB      O15    S15    C15     109.500    3.000
 TDB      O15    S15    N1      109.500    3.000
 TDB      C15    S15    N1      109.500    3.000
 TDB      S15    C15    H151    109.500    3.000
 TDB      S15    C15    H152    109.500    3.000
 TDB      S15    C15    C16     109.500    3.000
 TDB      H151   C15    H152    107.900    3.000
 TDB      H151   C15    C16     109.470    3.000
 TDB      H152   C15    C16     109.470    3.000
 TDB      C15    C16    H161    109.470    3.000
 TDB      C15    C16    H162    109.470    3.000
 TDB      C15    C16    C17     111.000    3.000
 TDB      H161   C16    H162    107.900    3.000
 TDB      H161   C16    C17     109.470    3.000
 TDB      H162   C16    C17     109.470    3.000
 TDB      C16    C17    H173    109.470    3.000
 TDB      C16    C17    H172    109.470    3.000
 TDB      C16    C17    H171    109.470    3.000
 TDB      H173   C17    H172    109.470    3.000
 TDB      H173   C17    H171    109.470    3.000
 TDB      H172   C17    H171    109.470    3.000
 TDB      S15    N1     N2      120.000    3.000
 TDB      S15    N1     B1      120.000    3.000
 TDB      N2     N1     B1      120.000    3.000
 TDB      N1     N2     C2      120.000    3.000
 TDB      N2     C2     H2      120.000    3.000
 TDB      N2     C2     C14     120.000    3.000
 TDB      H2     C2     C14     120.000    3.000
 TDB      C2     C14    S1      120.000    3.000
 TDB      C2     C14    C13     120.000    3.000
 TDB      S1     C14    C13     120.000    3.000
 TDB      C14    S1     C7       98.269    3.000
 TDB      N1     B1     O1      120.000    3.000
 TDB      N1     B1     C13     120.000    3.000
 TDB      O1     B1     C13     120.000    3.000
 TDB      B1     O1     HO1     120.000    3.000
 TDB      B1     C13    C12     120.000    3.000
 TDB      B1     C13    C14     120.000    3.000
 TDB      C12    C13    C14     120.000    3.000
 TDB      C13    C12    H12     108.000    3.000
 TDB      C13    C12    C7      108.000    3.000
 TDB      H12    C12    C7      126.000    3.000
 TDB      C12    C7     C8      108.000    3.000
 TDB      C12    C7     S1      108.000    3.000
 TDB      C8     C7     S1      108.000    3.000
 TDB      C7     C8     H83     109.470    3.000
 TDB      C7     C8     H82     109.470    3.000
 TDB      C7     C8     H81     109.470    3.000
 TDB      H83    C8     H82     109.470    3.000
 TDB      H83    C8     H81     109.470    3.000
 TDB      H82    C8     H81     109.470    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 TDB      var_1    O16    S15    C15    C16       70.259   20.000   1
 TDB      var_2    S15    C15    C16    C17     -179.973   20.000   3
 TDB      var_3    C15    C16    C17    H171     179.997   20.000   3
 TDB      var_4    O16    S15    N1     B1        25.940   20.000   1
 TDB      CONST_1  S15    N1     N2     C2       180.000    0.000   0
 TDB      CONST_2  N1     N2     C2     C14        0.000    0.000   0
 TDB      CONST_3  N2     C2     C14    S1       180.000    0.000   0
 TDB      CONST_4  C2     C14    S1     C7       180.000    0.000   0
 TDB      CONST_5  C14    S1     C7     C12        0.000    0.000   0
 TDB      CONST_6  S15    N1     B1     C13      180.000    0.000   0
 TDB      var_5    N1     B1     O1     HO1      179.754   20.000   1
 TDB      CONST_7  N1     B1     C13    C12      180.000    0.000   0
 TDB      CONST_8  B1     C13    C14    C2         0.000    0.000   0
 TDB      CONST_9  B1     C13    C12    C7       180.000    0.000   0
 TDB      CONST_10 C13    C12    C7     C8       180.000    0.000   0
 TDB      var_6    C12    C7     C8     H81      179.948   20.000   1
loop_
_chem_comp_chir.comp_id
_chem_comp_chir.id
_chem_comp_chir.atom_id_centre
_chem_comp_chir.atom_id_1
_chem_comp_chir.atom_id_2
_chem_comp_chir.atom_id_3
_chem_comp_chir.volume_sign
 TDB      chir_01  S15    N1     O15    O16       positiv
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 TDB      plan-1    C7        0.020
 TDB      plan-1    S1        0.020
 TDB      plan-1    C8        0.020
 TDB      plan-1    C12       0.020
 TDB      plan-1    C13       0.020
 TDB      plan-1    H12       0.020
 TDB      plan-1    C14       0.020
 TDB      plan-1    B1        0.020
 TDB      plan-1    C2        0.020
 TDB      plan-1    N2        0.020
 TDB      plan-1    N1        0.020
 TDB      plan-1    H2        0.020
 TDB      plan-1    S15       0.020
# ------------------------------------------------------