File: TF5.cif

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global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
TF5      TF5 '2-[(2',3',4'-TRIFLUOROBIPHENYL-2-YL)' non-polymer        30  19 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_TF5
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 TF5           F14    F    F         0.000      0.000    0.000    0.000
 TF5           C9     C    CR6       0.000     -1.337    0.053   -0.066
 TF5           C8     C    CR6       0.000     -1.973    1.256   -0.370
 TF5           F13    F    F         0.000     -1.247    2.359   -0.597
 TF5           C7     C    CR6       0.000     -3.365    1.312   -0.438
 TF5           F      F    F         0.000     -3.962    2.477   -0.732
 TF5           C6     C    CR6       0.000     -4.119    0.164   -0.201
 TF5           C11    C    CR16      0.000     -3.485   -1.040    0.103
 TF5           H11    H    H         0.000     -4.073   -1.931    0.287
 TF5           C10    C    CR16      0.000     -2.093   -1.096    0.171
 TF5           H10    H    H         0.000     -1.599   -2.030    0.407
 TF5           C2     C    CR6       0.000     -5.566    0.216   -0.271
 TF5           C1     C    CR16      0.000     -6.197   -0.034   -1.489
 TF5           H1     H    H         0.000     -5.606   -0.264   -2.368
 TF5           C      C    CR16      0.000     -7.588    0.011   -1.576
 TF5           H      H    H         0.000     -8.078   -0.183   -2.522
 TF5           C5     C    CR16      0.000     -8.348    0.306   -0.445
 TF5           H5     H    H         0.000     -9.428    0.341   -0.513
 TF5           C3     C    CR6       0.000     -6.326    0.512    0.861
 TF5           C4     C    CR16      0.000     -7.718    0.557    0.773
 TF5           H4     H    H         0.000     -8.308    0.786    1.652
 TF5           O      O    O2        0.000     -5.736    0.759    2.065
 TF5           C16    C    CH2       0.000     -5.978    2.034    2.655
 TF5           H161   H    H         0.000     -6.875    1.987    3.276
 TF5           H162   H    H         0.000     -6.120    2.781    1.870
 TF5           C17    C    CH2       0.000     -4.787    2.418    3.511
 TF5           H171   H    H         0.000     -4.653    1.680    4.305
 TF5           H172   H    H         0.000     -4.955    3.401    3.954
 TF5           O20    O    OH1       0.000     -3.622    2.456    2.695
 TF5           HO20   H    H         0.000     -3.256    1.565    2.618
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 TF5      F14    n/a    C9     START
 TF5      C9     F14    C8     .
 TF5      C8     C9     C7     .
 TF5      F13    C8     .      .
 TF5      C7     C8     C6     .
 TF5      F      C7     .      .
 TF5      C6     C7     C2     .
 TF5      C11    C6     C10    .
 TF5      H11    C11    .      .
 TF5      C10    C11    H10    .
 TF5      H10    C10    .      .
 TF5      C2     C6     C3     .
 TF5      C1     C2     C      .
 TF5      H1     C1     .      .
 TF5      C      C1     C5     .
 TF5      H      C      .      .
 TF5      C5     C      H5     .
 TF5      H5     C5     .      .
 TF5      C3     C2     O      .
 TF5      C4     C3     H4     .
 TF5      H4     C4     .      .
 TF5      O      C3     C16    .
 TF5      C16    O      C17    .
 TF5      H161   C16    .      .
 TF5      H162   C16    .      .
 TF5      C17    C16    O20    .
 TF5      H171   C17    .      .
 TF5      H172   C17    .      .
 TF5      O20    C17    HO20   .
 TF5      HO20   O20    .      END
 TF5      C10    C9     .    ADD
 TF5      C5     C4     .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 TF5      C10    C11       double      1.390    0.020
 TF5      C10    C9        single      1.390    0.020
 TF5      H10    C10       single      1.083    0.020
 TF5      C17    C16       single      1.524    0.020
 TF5      O20    C17       single      1.432    0.020
 TF5      H171   C17       single      1.092    0.020
 TF5      H172   C17       single      1.092    0.020
 TF5      C16    O         single      1.426    0.020
 TF5      H161   C16       single      1.092    0.020
 TF5      H162   C16       single      1.092    0.020
 TF5      C8     C9        double      1.487    0.020
 TF5      C7     C8        single      1.487    0.020
 TF5      F13    C8        single      1.345    0.020
 TF5      C6     C7        double      1.487    0.020
 TF5      F      C7        single      1.345    0.020
 TF5      C5     C4        double      1.390    0.020
 TF5      C5     C         single      1.390    0.020
 TF5      H5     C5        single      1.083    0.020
 TF5      C4     C3        single      1.390    0.020
 TF5      H4     C4        single      1.083    0.020
 TF5      O      C3        single      1.370    0.020
 TF5      C3     C2        double      1.487    0.020
 TF5      C1     C2        single      1.390    0.020
 TF5      C2     C6        single      1.487    0.020
 TF5      C      C1        double      1.390    0.020
 TF5      H      C         single      1.083    0.020
 TF5      C9     F14       single      1.345    0.020
 TF5      C11    C6        single      1.390    0.020
 TF5      H11    C11       single      1.083    0.020
 TF5      H1     C1        single      1.083    0.020
 TF5      HO20   O20       single      0.967    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 TF5      F14    C9     C8      120.000    3.000
 TF5      F14    C9     C10     120.000    3.000
 TF5      C8     C9     C10     120.000    3.000
 TF5      C9     C8     F13     120.000    3.000
 TF5      C9     C8     C7      120.000    3.000
 TF5      F13    C8     C7      120.000    3.000
 TF5      C8     C7     F       120.000    3.000
 TF5      C8     C7     C6      120.000    3.000
 TF5      F      C7     C6      120.000    3.000
 TF5      C7     C6     C11     120.000    3.000
 TF5      C7     C6     C2      120.000    3.000
 TF5      C11    C6     C2      120.000    3.000
 TF5      C6     C11    H11     120.000    3.000
 TF5      C6     C11    C10     120.000    3.000
 TF5      H11    C11    C10     120.000    3.000
 TF5      C11    C10    H10     120.000    3.000
 TF5      C11    C10    C9      120.000    3.000
 TF5      H10    C10    C9      120.000    3.000
 TF5      C6     C2     C1      120.000    3.000
 TF5      C6     C2     C3      120.000    3.000
 TF5      C1     C2     C3      120.000    3.000
 TF5      C2     C1     H1      120.000    3.000
 TF5      C2     C1     C       120.000    3.000
 TF5      H1     C1     C       120.000    3.000
 TF5      C1     C      H       120.000    3.000
 TF5      C1     C      C5      120.000    3.000
 TF5      H      C      C5      120.000    3.000
 TF5      C      C5     H5      120.000    3.000
 TF5      C      C5     C4      120.000    3.000
 TF5      H5     C5     C4      120.000    3.000
 TF5      C2     C3     C4      120.000    3.000
 TF5      C2     C3     O       120.000    3.000
 TF5      C4     C3     O       120.000    3.000
 TF5      C3     C4     H4      120.000    3.000
 TF5      C3     C4     C5      120.000    3.000
 TF5      H4     C4     C5      120.000    3.000
 TF5      C3     O      C16     120.000    3.000
 TF5      O      C16    H161    109.470    3.000
 TF5      O      C16    H162    109.470    3.000
 TF5      O      C16    C17     109.470    3.000
 TF5      H161   C16    H162    107.900    3.000
 TF5      H161   C16    C17     109.470    3.000
 TF5      H162   C16    C17     109.470    3.000
 TF5      C16    C17    H171    109.470    3.000
 TF5      C16    C17    H172    109.470    3.000
 TF5      C16    C17    O20     109.470    3.000
 TF5      H171   C17    H172    107.900    3.000
 TF5      H171   C17    O20     109.470    3.000
 TF5      H172   C17    O20     109.470    3.000
 TF5      C17    O20    HO20    109.470    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 TF5      CONST_1  F14    C9     C8     C7       180.000    0.000   0
 TF5      CONST_2  C9     C8     C7     C6         0.000    0.000   0
 TF5      CONST_3  C8     C7     C6     C2       180.000    0.000   0
 TF5      CONST_4  C7     C6     C11    C10        0.000    0.000   0
 TF5      CONST_5  C6     C11    C10    C9         0.000    0.000   0
 TF5      CONST_6  C11    C10    C9     F14      180.000    0.000   0
 TF5      CONST_7  C7     C6     C2     C3       180.000    0.000   0
 TF5      CONST_8  C6     C2     C1     C        180.000    0.000   0
 TF5      CONST_9  C2     C1     C      C5         0.000    0.000   0
 TF5      CONST_10 C1     C      C5     C4         0.000    0.000   0
 TF5      CONST_11 C      C5     C4     C3         0.000    0.000   0
 TF5      CONST_12 C6     C2     C3     O          0.000    0.000   0
 TF5      CONST_13 C2     C3     C4     C5         0.000    0.000   0
 TF5      var_1    C2     C3     O      C16      120.098   20.000   1
 TF5      var_2    C3     O      C16    C17     -150.942   20.000   1
 TF5      var_3    O      C16    C17    O20       59.129   20.000   3
 TF5      var_4    C16    C17    O20    HO20     -84.318   20.000   1
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 TF5      plan-1    C10       0.020
 TF5      plan-1    C9        0.020
 TF5      plan-1    C11       0.020
 TF5      plan-1    H10       0.020
 TF5      plan-1    C8        0.020
 TF5      plan-1    C7        0.020
 TF5      plan-1    C6        0.020
 TF5      plan-1    F13       0.020
 TF5      plan-1    F         0.020
 TF5      plan-1    F14       0.020
 TF5      plan-1    H11       0.020
 TF5      plan-1    C2        0.020
 TF5      plan-2    C5        0.020
 TF5      plan-2    C4        0.020
 TF5      plan-2    C         0.020
 TF5      plan-2    H5        0.020
 TF5      plan-2    C3        0.020
 TF5      plan-2    C2        0.020
 TF5      plan-2    C1        0.020
 TF5      plan-2    H4        0.020
 TF5      plan-2    O         0.020
 TF5      plan-2    C6        0.020
 TF5      plan-2    H         0.020
 TF5      plan-2    H1        0.020
# ------------------------------------------------------