File: XBT.cif

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global_
_lib_name         ?
_lib_version      ?
_lib_update       ?
# ------------------------------------------------
#
# ---   LIST OF MONOMERS ---
#
data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
XBT      XBT '2-[(1R)-1-methylpropyl]-4,5-dihydro-' non-polymer        22   9 .
# ------------------------------------------------------
# ------------------------------------------------------
#
# --- DESCRIPTION OF MONOMERS ---
#
data_comp_XBT
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.partial_charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
 XBT           C9     C    CH3       0.000      0.000    0.000    0.000
 XBT           H9     H    H         0.000      0.405   -0.774    0.599
 XBT           H9A    H    H         0.000      0.543    0.063   -0.908
 XBT           H9B    H    H         0.000      0.073    0.921    0.519
 XBT           C6     C    CH1       0.000     -1.470   -0.302   -0.302
 XBT           H6     H    H         0.000     -1.545   -1.257   -0.839
 XBT           C7     C    CH2       0.000     -2.052    0.818   -1.167
 XBT           H7     H    H         0.000     -1.897    1.779   -0.672
 XBT           H7A    H    H         0.000     -3.122    0.651   -1.308
 XBT           C8     C    CH3       0.000     -1.352    0.826   -2.528
 XBT           H8B    H    H         0.000     -0.313    0.990   -2.394
 XBT           H8A    H    H         0.000     -1.500   -0.106   -3.011
 XBT           H8     H    H         0.000     -1.754    1.600   -3.131
 XBT           C2     C    C         0.000     -2.240   -0.389    0.991
 XBT           N3     N    N         0.000     -2.888    0.571    1.522
 XBT           C4     C    CH2       0.000     -3.592    0.369    2.768
 XBT           H4     H    H         0.000     -4.652    0.578    2.608
 XBT           H12    H    H         0.000     -3.193    1.064    3.510
 XBT           C5     C    CH2       0.000     -3.424   -1.074    3.272
 XBT           H13    H    H         0.000     -4.374   -1.609    3.336
 XBT           H5     H    H         0.000     -2.915   -1.123    4.237
 XBT           S1     S    S2        0.000     -2.377   -1.840    1.992
loop_
_chem_comp_tree.comp_id
_chem_comp_tree.atom_id
_chem_comp_tree.atom_back
_chem_comp_tree.atom_forward
_chem_comp_tree.connect_type
 XBT      C9     n/a    C6     START
 XBT      H9     C9     .      .
 XBT      H9A    C9     .      .
 XBT      H9B    C9     .      .
 XBT      C6     C9     C2     .
 XBT      H6     C6     .      .
 XBT      C7     C6     C8     .
 XBT      H7     C7     .      .
 XBT      H7A    C7     .      .
 XBT      C8     C7     H8     .
 XBT      H8B    C8     .      .
 XBT      H8A    C8     .      .
 XBT      H8     C8     .      .
 XBT      C2     C6     N3     .
 XBT      N3     C2     C4     .
 XBT      C4     N3     C5     .
 XBT      H4     C4     .      .
 XBT      H12    C4     .      .
 XBT      C5     C4     S1     .
 XBT      H13    C5     .      .
 XBT      H5     C5     .      .
 XBT      S1     C5     .      END
 XBT      S1     C2     .    ADD
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
 XBT      S1     C2        single      1.665    0.020
 XBT      S1     C5        single      1.762    0.020
 XBT      N3     C2        double      1.260    0.020
 XBT      C2     C6        single      1.500    0.020
 XBT      C4     N3        single      1.455    0.020
 XBT      C5     C4        single      1.524    0.020
 XBT      H4     C4        single      1.092    0.020
 XBT      H5     C5        single      1.092    0.020
 XBT      C7     C6        single      1.524    0.020
 XBT      C6     C9        single      1.524    0.020
 XBT      H6     C6        single      1.099    0.020
 XBT      C8     C7        single      1.513    0.020
 XBT      H7     C7        single      1.092    0.020
 XBT      H7A    C7        single      1.092    0.020
 XBT      H8     C8        single      1.059    0.020
 XBT      H8A    C8        single      1.059    0.020
 XBT      H8B    C8        single      1.059    0.020
 XBT      H9     C9        single      1.059    0.020
 XBT      H9A    C9        single      1.059    0.020
 XBT      H9B    C9        single      1.059    0.020
 XBT      H12    C4        single      1.092    0.020
 XBT      H13    C5        single      1.092    0.020
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
 XBT      H9     C9     H9A     109.470    3.000
 XBT      H9     C9     H9B     109.470    3.000
 XBT      H9A    C9     H9B     109.470    3.000
 XBT      H9     C9     C6      109.470    3.000
 XBT      H9A    C9     C6      109.470    3.000
 XBT      H9B    C9     C6      109.470    3.000
 XBT      C9     C6     H6      108.340    3.000
 XBT      C9     C6     C7      111.000    3.000
 XBT      C9     C6     C2      109.470    3.000
 XBT      H6     C6     C7      108.340    3.000
 XBT      H6     C6     C2      108.810    3.000
 XBT      C7     C6     C2      109.470    3.000
 XBT      C6     C7     H7      109.470    3.000
 XBT      C6     C7     H7A     109.470    3.000
 XBT      C6     C7     C8      111.000    3.000
 XBT      H7     C7     H7A     107.900    3.000
 XBT      H7     C7     C8      109.470    3.000
 XBT      H7A    C7     C8      109.470    3.000
 XBT      C7     C8     H8B     109.470    3.000
 XBT      C7     C8     H8A     109.470    3.000
 XBT      C7     C8     H8      109.470    3.000
 XBT      H8B    C8     H8A     109.470    3.000
 XBT      H8B    C8     H8      109.470    3.000
 XBT      H8A    C8     H8      109.470    3.000
 XBT      C6     C2     N3      116.500    3.000
 XBT      C6     C2     S1      120.000    3.000
 XBT      N3     C2     S1      120.000    3.000
 XBT      C2     N3     C4      127.000    3.000
 XBT      N3     C4     H4      109.470    3.000
 XBT      N3     C4     H12     109.470    3.000
 XBT      N3     C4     C5      105.000    3.000
 XBT      H4     C4     H12     107.900    3.000
 XBT      H4     C4     C5      109.470    3.000
 XBT      H12    C4     C5      109.470    3.000
 XBT      C4     C5     H13     109.470    3.000
 XBT      C4     C5     H5      109.470    3.000
 XBT      C4     C5     S1      109.500    3.000
 XBT      H13    C5     H5      107.900    3.000
 XBT      H13    C5     S1      109.500    3.000
 XBT      H5     C5     S1      109.500    3.000
 XBT      C5     S1     C2       95.587    3.000
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
 XBT      var_1    H9B    C9     C6     C2       -59.936   20.000   3
 XBT      var_2    C9     C6     C7     C8        65.040   20.000   3
 XBT      var_3    C6     C7     C8     H8       179.942   20.000   3
 XBT      var_4    C9     C6     C2     N3        94.980   20.000   3
 XBT      CONST_1  C6     C2     N3     C4       180.000    0.000   0
 XBT      var_5    C2     N3     C4     C5         0.000   20.000   1
 XBT      var_6    N3     C4     C5     S1         0.000   20.000   3
 XBT      var_7    C4     C5     S1     C2         0.000   20.000   1
 XBT      var_8    C5     S1     C2     C6       180.000   20.000   1
loop_
_chem_comp_chir.comp_id
_chem_comp_chir.id
_chem_comp_chir.atom_id_centre
_chem_comp_chir.atom_id_1
_chem_comp_chir.atom_id_2
_chem_comp_chir.atom_id_3
_chem_comp_chir.volume_sign
 XBT      chir_01  C6     C2     C7     C9        negativ
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
 XBT      plan-1    C2        0.020
 XBT      plan-1    S1        0.020
 XBT      plan-1    N3        0.020
 XBT      plan-1    C6        0.020
 XBT      plan-2    N3        0.020
 XBT      plan-2    C2        0.020
 XBT      plan-2    C4        0.020
# ------------------------------------------------------