File: autogen.sh

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relion 1.4+dfsg-4
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#Some path variables
setenv RELION_HOME $PWD
setenv PREFIX $RELION_HOME
autoreconf --install
setenv fltk_cxx `fltk-config --cxxflags`
setenv fltk_ld `fltk-config --ldflags`
 ./configure --enable-mpi CPPFLAGS="-I/lmb/home/scheres/app/fftw-3.2.2/include -I$PREFIX/include $fltk_cxx" LDFLAGS="-L/lmb/home/scheres/app/fftw-3.2.2/lib -L$PREFIX/lib $fltk_ld"