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[project]
name = "resfinder"
dynamic = ["version"]
description = """ResFinder identifies acquired genes and/or finds chromosomal /
mutations mediating antimicrobial resistance in total or /
partial DNA sequence of bacteria."""
authors = [
{name = "Center for Genomic Epidemiology", email = "food-cgehelp@dtu.dk"},
]
dependencies = [
"cgelib>=0.7.3",
"cgecore==1.5.6",
"tabulate>=0.8.9",
"pandas>=1.4.2",
"biopython>=1.79"]
requires-python = ">=3.8"
readme = "README.md"
license = {text = "Apache-2.0"}
[tool.pdm.version]
source = "file"
path = "src/resfinder/__init__.py"
[tool.pdm.dev-dependencies]
test = [
"pytest>=7.1.2",
]
[tool.pdm.scripts]
test = "python -m pytest tests/"
resfinder = "python -m resfinder"
[build-system]
requires = ["pdm-backend"]
build-backend = "pdm.backend"
|
