1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
|
#include "SoloBarcode.h"
#include "serviceFuns.cpp"
void SoloBarcode::sortWhiteList()
{
totalSize=0;
minLen=(uint32)-1;
wlAdd.resize( wl.size() );
for (uint32 ilen=1; ilen < wl.size(); ilen++) {//scan through different lengths for this CB
wlAdd[ilen]=totalSize;
if (wl[ilen].size()>0) {
if (ilen<minLen)
minLen=ilen;
std::sort(wl[ilen].begin(),wl[ilen].end());//sort
auto un1=std::unique(wl[ilen].begin(),wl[ilen].end());//collapse identical
wl[ilen].resize(std::distance(wl[ilen].begin(),un1));
totalSize += wl[ilen].size();
};
};
};
void SoloBarcode::extractPositionsFromString(string &strIn)
{
vector<string> p(4);
splitString(strIn,'_',p);
anchorType[0] = std::stoi(p[0]);
anchorType[1] = std::stoi(p[2]);
anchorDist[0] = std::stoi(p[1]);
anchorDist[1] = std::stoi(p[3]);
};
|
