File: signalFromBAM.h

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#ifndef CODE_signalFromBAM
#define CODE_signalFromBAM
#include <htslib/sam.h>
#include  <fstream>
#include <string>
#include "Stats.h"
#include "Parameters.h"

using namespace std;

void signalFromBAM(const string bamFileName, const string sigFileName, Parameters P);

#endif