File: protein_alignment_from_nucleotides

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#!/usr/bin/env perl

package Bio::Roary::Main::GeneAlignmentFromNucleotides;

# ABSTRACT: Take in multi-FASTA files of nucleotides and align each file with PRANK or MAFFT
# PODNAME: protein_alignment_from_nucleotides

=head1 SYNOPSIS

Take in multi-FASTA files of nucleotides and align each file with PRANK or MAFFT

=cut

use Cwd qw(abs_path); 
BEGIN { unshift( @INC, abs_path('./lib') ) }
BEGIN { unshift( @INC, abs_path('./t/lib') ) }
use Bio::Roary::CommandLine::GeneAlignmentFromNucleotides;

Bio::Roary::CommandLine::GeneAlignmentFromNucleotides->new(args => \@ARGV, script_name => $0)->run;