File: shred2.gff

package info (click to toggle)
roary 3.13.0%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: bookworm, bullseye, sid, trixie
  • size: 3,944 kB
  • sloc: perl: 10,536; sh: 211; makefile: 9
file content (9 lines) | stat: -rw-r--r-- 892 bytes parent folder | download | duplicates (5) 
1
2
3
4
5
6
7
8
9
 
##gff-version 3
##sequence-region shredA 1 40
##sequence-region shredB 1 40
shredA	Prodigal:2.60	CDS	179	1471	.	-	0	ID=11983_1#21_00001;eC_number=2.7.13.3;gene=regB;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_005150533.1,similar to AA sequence:UniProtKB:Q3J6C1,protein motif:CLUSTERS:PRK11360,protein motif:Cdd:COG4191,protein motif:TIGRFAMs:TIGR02966,protein motif:Pfam:PF02518.20;locus_tag=11983_1#21_00001;product=integral membrane sensor signal transduction histidine kinase,Sensor histidine kinase regB,sensory histidine kinase AtoS,Signal transduction histidine kinase regulating C4-dicarboxylate transport system,phosphate regulon sensor kinase PhoR,Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase;protein_id=gnl|SC|11983_1#21_00001
##FASTA
>shredA
AAAAAAAAAAGGGGGGGGGGTTTTTTTTTTCCCCCCCCCC
>shredB
AAAAAAAAAACCCCCCCCCCTTTTTTTTTTGGGGGGGGGG