2008-05-13 03:32  warnes

	* [r513] setup.py: Add notes on what is necessary to build against
	  multiple versions of R on OSX

2008-05-09 21:17  warnes

	* [r511] TODO: Add to TODO.

2008-05-09 21:16  warnes

	* [r510] src/rpymodule.c: Patch to correct link problem with
	  R-2.7.0

2008-04-16 14:19  warnes

	* [r489] rpy.py: Fix R.__repr__() bug.

2008-04-10 16:51  warnes

	* [r487] NEWS, rpy_version.py: Update for RPy release 1.0.2

2008-04-10 16:50  warnes

	* [r486] examples/nnet.py: Add simple neural net example

2008-04-10 16:49  warnes

	* [r485] src/rpymodule.c: Use R's internal function to clean up R
	  temporary directory for R 2.4.0 and later

2008-04-10 13:45  warnes

	* [r484] src/rpymodule.c: Correct the handling of CStackLimit code.

2008-04-03 23:26  warnes

	* [r475] tests/test_robj.py: Use failUnless / failUnlessRaises
	  instead of assertTrue / assertRaises in test_robj.py for
	  compatibility with python 2.3

2008-01-29 19:41  lgautier

	* [r403] src/rpymodule.c: changed function types form ssizeargfunc
	  to intargfunc,
	  and ssizessizeargfunc to intintargfunc (for
	  compatibility with Python 2.4).
	  It compiles with Python 2.5 with warnings. Conditional
	  definitions will probably have to be made for Python 2.6 (or
	  before
	  to clear up the warnings).

2008-01-27 14:15  lgautier

	* [r402] src/rpymodule.c, tests/test_robj.py: - Added getslice
	  methods for Robject
	  - Added unit-tests for it
	  - Added unit-tests for getItem

2008-01-25 20:14  warnes

	* [r401] rpy_tools.py: Correct name of runtime exception

2008-01-21 16:08  eddelbuettel

	* [r400] debian/changelog, debian/control: Updated debian/ to
	  current upload 1.0.1-2

2008-01-21 16:00  eddelbuettel

	* [r399] doc/rpy.texi: corrected simple line plot example

2008-01-21 15:59  eddelbuettel

	* [r398] debian/changelog, debian/control, debian/overrides,
	  debian/rules: updated to current version

2008-01-07 17:16  warnes

	* [r397] src/rpymodule.c: Correct mismatch between declaration and
	  definition of init_embedded_win32

2008-01-07 16:03  warnes

	* [r396] src/rpymodule.c: Add ability to pass command-line
	  argumnents to init_embedded_win32

2008-01-07 16:01  warnes

	* [r395] tests/test_sigint.py: Add 1 second sleep to interrupt test
	  to allow time for interrupt delivery

2008-01-02 17:57  warnes

	* [r394] rpy.py, src/rpymodule.c: Add code to export 'Robj' type

2008-01-02 17:34  warnes

	* [r393] src/io.c: Minor code reformatting in io.c

2008-01-02 17:33  warnes

	* [r392] rpy_tools.py: Use 'tail -n 1' instead of 'tail -1' when
	  calling 'R RHOME' to make recent versions of tail happy

2008-01-02 17:29  warnes

	* [r391] rpy.py, rpy_options.py: Add startup options to prevent
	  initialization of console read/write/showfiles

2007-11-30 01:44  warnes

	* [r390] NEWS: Update NEWS for 1.0.1

2007-11-30 01:27  warnes

	* [r389] rpy_version.py: Update version to 1.0.1

2007-11-30 01:00  warnes

	* [r388] doc/defs.texi, doc/rpy.texi: Update copyright notice in
	  documentation

2007-11-30 00:57  warnes

	* [r387] rpy.py: Remove debug print statments

2007-11-30 00:56  warnes

	* [r386] rpy_wintools.py: Improve detection of R installation
	  directories on Win32

2007-11-30 00:55  warnes

	* [r385] setup.bat: Improve Win32 setup.bat build script

2007-11-30 00:40  warnes

	* [r384] src/RPy.h, src/rpymodule.c: Add appropriate cleanup shell
	  command for Win32

2007-11-29 16:12  warnes

	* [r383] INSTALL.WINDOWS, setup.bat: Update windows compile
	  instructions and batch file

2007-11-29 16:07  warnes

	* [r382] rpy.py: Move rpy module load back inside try:except block

2007-11-29 16:06  warnes

	* [r381] setup.py: ensure RHOMES is in ascii, since most command
	  line tools are unhappy with unicode...

2007-11-29 15:59  warnes

	* [r380] src/RPy.h, src/rpymodule.c: Apply tiny patch to fix Win32
	  startup problem.

2007-11-20 02:18  eddelbuettel

	* [r379] debian/changelog, debian/compat, debian/control,
	  debian/overrides, debian/rules: sync with files of Debian 1.0.0-1
	  release of rpy

2007-11-15 05:24  warnes

	* [r378] NEWS: Update for v 1.0.0

2007-11-15 04:59  warnes

	* [r377] rpy_version.py: update version to 1.0.0 (after thinking
	  about it)

2007-11-15 04:17  warnes

	* [r376] rpy_version.py: update version to 1.1-Beta1

2007-11-15 04:08  warnes

	* [r375] tests/test_modes.py: Comment out gc code, only needed when
	  debugging

2007-11-15 03:47  warnes

	* [r374] tests/test_numeric.py: Change function to_r used in tests
	  to make it more reliable

2007-11-15 03:22  warnes

	* [r373] tests/test_io.py: Add code to test_io to return io
	  redirection to initial state after each test

2007-11-13 16:24  warnes

	* [r372] tests/testall.py: Add ability to loop over test cases

2007-11-13 15:41  warnes

	* [r371] tests/test_numeric.py: Improve display of messages about
	  tests being skipped (more)

2007-11-13 15:37  warnes

	* [r370] tests/test_numeric.py: Improve display of messages about
	  tests being skipped

2007-11-13 15:35  warnes

	* [r369] tests/test_numeric.py: Numeric.Character isn't handled
	  (yet?), so modify test appropriately

2007-11-13 15:28  warnes

	* [r368] tests/test_numeric.py: Minor reformatting of
	  test_numeric.py

2007-11-13 06:43  warnes

	* [r367] tests/test_numeric.py: Select which syntax variant to use
	  by which library was loaded, rather than using try:except to try
	  a second variance after the first failed.

2007-11-13 06:27  warnes

	* [r366] tests/test_array.py, tests/test_numeric.py: Fix array test
	  to explicitly check elements of 3 dimensional objects for
	  equality.

2007-11-13 06:26  warnes

	* [r365] src/rpymodule.c: More work on handling Numeric/NumPy array
	  and scalar objects. Only NumPy string/unicode/char objects are
	  still unhandled, AFAIK.

2007-11-13 06:13  warnes

	* [r364] setup.py: Add /usr/share/R/include path for Ubuntu
	  (?Debian?) R include files

2007-11-12 23:27  warnes

	* [r363] TODO, rpy.py, setup.py, src/RPy.h, src/R_eval.c,
	  src/rpymodule.c, tests/test_array.py, tests/test_numeric.py,
	  tests/test_robj.py, tests/test_tor.py, tests/test_util.py: - Add
	  three new exceptions:
	  RPyException Base exception class for all RPy Exceptions
	  RPyTypeConversionException Error in conversion between R and
	  Python
	  RPyRException Error raised within R
	  
	  (RException is set equal to RPyException for backwards
	  compatibility)
	  
	  - Properly handle all Numeric/NumPy array types
	  
	  - Solve 64 bit problems converting Numeric/NumPy arrays

2007-11-06 16:49  warnes

	* [r362] src/RPy.h, src/rpymodule.c: Apply patch submitted by
	  Matthew Brett to resolve array size issues on 64 bit platforms

2007-10-18 19:40  warnes

	* [r361] src/rpymodule.c: More fixes for handling of Unicode
	  strings. Suggested by Toby Dylan Hocking.

2007-10-18 01:54  warnes

	* [r359] src/rpymodule.c: Remove unneeded comment

2007-10-18 01:36  warnes

	* [r358] rpy_wintools.py: Apply patch [ 1808836 ] Install-script
	  tweaking for Windows

2007-10-18 01:26  warnes

	* [r357] src/rpymodule.c: Handle python unicode strings in calls to
	  R by first converting to python ascii strings

2007-10-08 20:35  warnes

	* [r356] setup.py: Testing whewther Numeric is present was broken.
	  Fixed.

2007-10-08 20:33  warnes

	* [r355] rpy_options.py: Change default for rpy_options.VERBOSE to
	  False

2007-10-08 20:26  warnes

	* [r354] src/rpymodule.c: Use proper test for whether R_CStackLimit
	  can/should be set

2007-10-08 19:09  warnes

	* [r353] tests/testall.py: Show modules to be tested

2007-05-18 15:41  warnes

	* [r351] rpy_version.py: Update version number

2007-03-24 21:40  warnes

	* [r344] src/rpymodule.c: R_CStackLimit is only present on
	  Unix-like systems, so omit it on Win32.

2007-03-12 22:50  warnes

	* [r343] src/rpymodule.c: Applied patch created by Andrew McNamara
	  that resolves the C stack limit error produced by R in some
	  contexts, such as resizing the x11() window.

2007-02-20 16:41  warnes

	* [r342] rpy.py, setup.py, src/RPy.h, src/rpymodule.c,
	  tests/test_array.py, tests/test_numeric.py, tests/test_topy.py:
	  Initial attempt to apply Numpy support patch provided by
	  Alexander Belopolsky

2006-12-11 18:59  alain001

	* [r341] rpy_version.py: Added config for other R versions.

2006-09-16 00:37  eddelbuettel

	* [r340] debian/changelog, debian/control, debian/pycompat,
	  debian/python-rpy.postinst, debian/python-rpy.preinst,
	  debian/python-rpy.prerm, debian/rules: updated debian/* files

2006-08-18 14:19  alain001

	* [r339] rpy.py: Moved some code so no longer necessary to have
	  R/bin in PATH

2006-08-08 19:29  alain001

	* [r338] rpy_version.py: 1.0-RC1

2006-08-08 19:27  alain001

	* [r337] setup.py: Changed contact info.

2006-08-07 19:04  alain001

	* [r336] tests/testall.py: Better filtering of module names

2006-08-07 15:05  alain001

	* [r335] tests/test_topy.py: Removed some tests related to NA and
	  NAN

2006-08-04 16:35  alain001

	* [r334] tests/test_io.py: Skip tests involving set_rpy_showfiles()
	  for win32

2006-06-21 12:52  eddelbuettel

	* [r333] debian/changelog, debian/control, debian/rules: updated
	  debian/ to the 'New Debian Python Policy'

2006-04-06 02:03  eddelbuettel

	* [r304] debian/changelog, debian/rules, doc/rpy.texi,
	  rpy_tools.py: - rpy_tools.py: Render regular expression for R
	  version less strict to
	  cope with switch from 'R x.y.z' to 'Version x.y.z' as in the
	  current
	  R 2.3.0 alpha release
	  - doc/rpy.texi: Move include of defs.texi up so that RPy is
	  defined in title
	  - debian/rules: Additional removals in clean target
	  - debian/changelog: Entry for 0.99.2-1

2006-04-04 18:28  warnes

	* [r303] NEWS: Clarify text.

2006-04-04 18:23  warnes

	* [r302] NEWS, rpy_version.py, setup.bat: Bump up version number
	  and NEWS for new build to correct lack of Numeric support in
	  Windows distribution.

2006-03-25 01:35  warnes

	* [r300] debian/changelog, debian/copyright,
	  debian/python-rpy-doc.doc-base, debian/rules, doc/defs.texi,
	  doc/rpy.texi: Changes submitted by Dirk Eddelbuettel:
	  
	  The documentation wouldn't build in all the forms I needed. See
	  the
	  attached diff, esp at the end -- in rpy.texi I 'pulled' defs.texi
	  a
	  few lines higher so that the RPy macro is known, and for some odd
	  reason I also needed to edit your email address in the comment
	  header of defs.texi. Same behaviour on Debian testing and in the
	  Debian unstable chroot the packages are built in. There are a few
	  more debian/ changes in the diff that you sync to the archive.

2006-03-22 22:13  warnes

	* [r299] COPYING, GPL_LICENSE, LGPL_LICENSE, MPL_LICENSE, README,
	  doc/Makefile, doc/defs.texi, doc/rpy.texi, rpy_wintools.py,
	  setup.Win32, setup.bat, setup.in, src/RPy.h, src/R_eval.c,
	  src/io.c, src/robjobject.h, src/rpy_Rinterface.h,
	  src/rpy_Startup.h, src/rpymodule.c, src/setenv.c, src/setenv.h:
	  Add tri-way license: MPL, GPL, LGPL

2006-03-22 22:07  warnes

	* [r298] rpy_version.py: - Fix startup crash on win32
	  - Allow use of MPL, GPL, or LGPL.

2006-03-22 22:05  warnes

	* [r297] rpy.py: Fix crash on win32 due to omission (was commented
	  out!) of explicit dll load.

2006-03-16 16:32  warnes

	* [r293] MANIFEST.in: Update MANIFEST.in to exclude svn files.

2006-03-16 15:22  warnes

	* [r292] debian/rules: My bad. Add compile flags to the build
	  section, not the install section!

2006-03-16 00:10  warnes

	* [r291] debian/python-rpy-doc.doc-base,
	  debian/python-rpy-doc.postinst, debian/python-rpy-doc.prerm,
	  debian/watch: debian build changes per Dirk Eddelbuettel
	  <edd@debian.org>

2006-03-16 00:07  warnes

	* [r290] debian/changelog, debian/control, debian/rules: debian
	  build changes per Dirk Eddelbuettel <edd@debian.org>

2006-03-16 00:03  warnes

	* [r289] NEWS, rpy_version.py: Update version numer and NEWS file
	  for 0.99.0 release

2006-03-15 23:43  warnes

	* [r288] INSTALL.WINDOWS, rpy_wintools.py, setup.Win32, setup.bat,
	  setup.cfg, setup.py: Dramatically simplify the build process for
	  Win32. The gcc and ld
	  included in MinGW 5.0.2 can now linking directly against DLL's,
	  removing the need for much of the previous complexity.

2006-03-15 23:29  warnes

	* [r287] setup.in: Add comments showing full set of configuration
	  options

2006-03-15 23:27  warnes

	* [r286] debian/rules: Provide explicit path to R include files

2006-03-15 19:01  warnes

	* [r285] setup.cfg: Add setup.cfg template to allow users to more
	  easily customize build/install options.

2006-03-10 21:34  warnes

	* [r284] MANIFEST.in, setup.py, src/rpymodule.c: This code now
	  works on both Linux and Windows.
	  
	  For windows:
	  - libpythonXX.a must be in C:/pythonXX/libs
	  - R.dll, R.def, and libR.a need to be in the rpy directory
	  
	  Otherwise, a badly mangled version of the full path to the dll
	  gets
	  inserted into the binary. Grrr. This is probably a bug in the
	  mingw version of ld, but it seems to be longstanding.

2006-03-10 13:42  warnes

	* [r283] rpy_wintools.py, setup.py: Remove partially working win32
	  changes

2006-03-10 12:56  warnes

	* [r281] setup.py: Revert a couple of minor changes

2006-03-10 06:18  warnes

	* [r280] mingw_buildrpy.bat, rpy.py, rpy_option.py, rpy_options.py,
	  rpy_tools.py, rpy_wintools.py, setup.py, src/RPy.h,
	  src/rpy_Rinterface.h, src/rpy_Startup.h, src/rpymodule.c,
	  win_tools.py: More modifications. For some reason, with
	  MinGW,using -L<PATH> causes the names
	  of dlls required by the generated dll to get mangled. This
	  prevents
	  the correct DLL from being found at run time.
	  
	  I'm not sure how to get around this.

2006-03-06 22:22  warnes

	* [r279] INSTALL.WINDOWS, MANIFEST.in, rpy.py, setup.py,
	  win_tools.py: More win32 work. DLL error on load.

2006-03-03 22:10  warnes

	* [r278] INSTALL.WINDOWS, mingw_buildrpy.bat, rpy.py,
	  rpy_option.py, rpy_tools.py, setup.py, src/RPy.h,
	  src/rpy_Rinterface.h, src/rpymodule.c, win_tools.py: `cat
	  commit.txt`

2006-03-02 19:32  warnes

	* [r277] rpy.py, rpy_tools.py, src/rpymodule.c: Communicate RHOME,
	  RVER, RVERSION, RUSER from python to C code using
	  environment variables. This avoids the need to have duplicate C
	  code to obtain these values.

2006-03-02 17:34  warnes

	* [r276] src/rpymodule.c: Undo recent changes to rpymodule. Decided
	  to use a different approach.

2006-03-01 21:24  warnes

	* [r275] src/rpymodule.c: Remove code to determine location of R
	  shared library. Instead realy on RPy.py to pass these in.

2006-02-28 23:24  warnes

	* [r274] rpy.py, rpy_tools.py: More fixes for win32

2006-02-28 14:57  warnes

	* [r271] setup.py: Correct 'RHOME' to 'RHOMES' in introductory help
	  text.

2006-02-28 14:51  warnes

	* [r270] rpy.py: Fix bugs on windows.

2006-02-28 14:34  warnes

	* [r269] doc/Makefile, doc/README, doc/manual.texi, doc/rpy.texi:
	  rename manual.text to rpy.texi to better match standard usage of
	  info files

2006-02-27 23:23  warnes

	* [r268] setup.py, src/rpymodule.c: Hopefully, these changes fix
	  run-time testing for the absence of
	  Numeric when the code was compiled with Numeric present.

2006-02-27 23:15  warnes

	* [r267] rpy.py: Add workaround for windows plotting issue. Correct
	  fix is to get
	  the eventloop working properly.

2006-02-27 22:36  warnes

	* [r266] setup.py: OSX is now using an external BLAS library, so
	  remove Rlapack link
	  option.

2006-02-27 22:32  warnes

	* [r265] INSTALL.WINDOWS: Update text regarding need to install
	  Numeric and add URL.

2006-02-27 21:59  warnes

	* [r259] INSTALL.WINDOWS: Make instructions more clear about the
	  need for the 'Numeric'
	  package.

2005-11-04 06:13  andrewmcnamara

	* [r258] tests/test_tor.py: Add test for bug ID 1277392.

2005-11-04 05:50  andrewmcnamara

	* [r257] src/rpymodule.c: Fixed bug 1277392 - if an Robj was
	  encounted as the first item in a
	  sequence being converted to an R object, then seq_to_R would
	  return NULL
	  (without setting the python error flag). Prior to revision 1.26,
	  an
	  "any" would be returned. This change reinstates the old behavior.

2005-10-10 20:51  warnes

	* [r256] rpy.py, rpy_version.py: Fix bug in __repr__

2005-10-10 19:59  warnes

	* [r255] rpy.py: Attempt to set the binary path for Windows

2005-10-10 19:58  warnes

	* [r254] NEWS: old changes.

2005-10-07 01:54  andrewmcnamara

	* [r253] rpy.py: At exit, attempt to stop the event loop before
	  Python dismantles everything
	  (which causes the event loop to throw an exception).

2005-10-06 05:35  andrewmcnamara

	* [r252] src/rpymodule.c, tests/test_robj.py: Additional error
	  checking for keyword arguments (and associated tests).

2005-10-06 05:31  andrewmcnamara

	* [r251] setup.py: setup.py's "mtime()" function was not returning
	  the modification time.
	  Changed to simply alias sys.path.getmtime().

2005-07-28 14:25  warnes

	* [r232] NEWS, rpy_version.py, src/rpymodule.c: For version 0.4.6

2005-07-28 04:55  warnes

	* [r230] rpy_tools.py, setup.py: - Strip leading and trailing
	  spaces from RHOME.
	  - Display contents of RHOMES

2005-07-28 02:23  warnes

	* [r229] NEWS, tests/test_noninteractive.py: Fix typo.

2005-07-27 17:59  warnes

	* [r228] tests/test_noninteractive.py: Add testcase to catch R
	  terminating rather than raising the
	  exception when run non-interactively via stdin redirection.

2005-07-27 17:56  warnes

	* [r227] rpy.py: Wait for all threads to exit before doing R clean
	  up.

2005-07-27 16:01  warnes

	* [r226] tests/test_boolean.py, tests/test_numeric.py,
	  tests/test_tor.py, tests/test_vars.py, tests/testall.py: Make
	  sure default mode is set back to NO_DEFAULT before running each
	  test. Otherwise some tests will fail if a previous test didn't
	  changed the mode.

2005-07-27 13:42  warnes

	* [r225] rpy.py: Fix missing import and typo for Win32 reported by
	  Wei-Hao Lin

2005-07-27 03:05  warnes

	* [r224] rpy.py, src/RPy.h, src/R_eval.c, src/rpymodule.c,
	  tests/test_vars.py: Fix bug reported by Nicolas Lebas: Segfault
	  when accessing r objects
	  via r.<varname>. It turns out the code was only properly handling
	  this for R function objects.
	  
	  Resolution:
	  
	  1) Rename get_from_name to get_fun_from_name and get to get_fun
	  to
	  show that these calls should only be used for R function objects.
	  
	  2) Modify the R class to call R's 'get' function instead of using
	  get_fun().
	  
	  3) Add comments to get_fun_from_names to elucidate the
	  non-obvious
	  code there.

2005-07-27 02:59  warnes

	* [r223] setup.py: Create/overwrite <foo><RVer>.c files only if
	  they don't exist or are
	  out of date.

2005-07-25 14:45  warnes

	* [r222] NEWS: Fix version number typo

2005-07-25 14:29  warnes

	* [r221] NEWS: Update for 0.4.5

2005-07-25 14:20  warnes

	* [r220] setup.py: setup.py doesn't seem to like an author without
	  an email.

2005-07-25 14:20  warnes

	* [r219] MANIFEST.in: We need to exclude version-specific source
	  files created by the
	  multi-R changes.

2005-07-25 14:09  warnes

	* [r218] rpy_version.py: Update version number.

2005-07-25 14:07  warnes

	* [r217] setup.py: Modify setup.py to build & install for multiple
	  R versions,
	  following Bo Peng's contributions.

2005-07-25 13:15  warnes

	* [r216] INSTALL.WINDOWS, mingw_buildrpy.bat, rpy_version.py:
	  Update windows build instructions. Provide mingw_buildrpy.bat

2005-07-25 13:06  warnes

	* [r215] src/rpy_Rinterface.h: Add rpy_Rinterface.h, which is used
	  for R versions before 2.1.0.

2005-07-23 04:41  warnes

	* [r213] NEWS: Document changes to warning message display.

2005-07-23 04:39  warnes

	* [r212] src/rpymodule.c: Show warnign messages after each R
	  evaluation.

2005-07-23 04:34  warnes

	* [r211] NEWS: Update for 0.4.4

2005-07-23 04:17  warnes

	* [r210] rpy.py, rpy_version.py, src/RPy.h, src/rpy_Startup.h,
	  src/rpymodule.c: Avoid calling numeric when it is not available
	  at runtime.

2005-07-23 02:59  warnes

	* [r209] MANIFEST.in: Omit core files!

2005-07-23 00:03  warnes

	* [r208] MANIFEST.in: Trying to remove tidla terminated files
	  resulted in no files.

2005-07-21 17:35  warnes

	* [r206] setup.py: Windows doesn't know what to do with
	  runtime_libs.

2005-07-21 03:33  warnes

	* [r205] setup.py: Win32 requires that the quotes around DEFINE's
	  are escaped.

2005-07-21 03:23  warnes

	* [r204] rpy_tools.py: - Raise RuntimeError instead of Distutils
	  error.
	  - Quote R command so that embedded spaces won't cause problems.

2005-07-20 06:51  warnes

	* [r202] NEWS: Spelling!

2005-07-20 06:35  warnes

	* [r201] doc/manual.texi: Update documentation to reflect new
	  'VECTOR_CONVERSION' mode.

2005-07-20 05:38  warnes

	* [r200] NEWS, rpy.py, rpy_tools.py, setup.py, src/rpymodule.c:
	  Complete work for version-specific shared libraries.

2005-07-20 05:29  warnes

	* [r199] tests/logit.r: Add logit.r required by
	  test_lapack_load.py.

2005-07-19 20:40  warnes

	* [r198] tests/test_lapack_load.py: Add test that we can load the
	  Rlapack library.

2005-07-19 20:39  warnes

	* [r197] NEWS, rpy.py, src/RPy.h, src/rpymodule.c,
	  tests/test_array.py, tests/test_modes.py, tests/test_numeric.py,
	  tests/test_robj.py, tests/test_topy.py, tests/test_tor.py,
	  tests/test_util.py: - Add support for python boolean objects. R
	  Logicals are now
	  converted to/from Python booleans.
	  
	  - New translation mode 'VECTOR_CONVERSION', which differs from
	  'BASIC_CONVERSION' in that R objects are always returned as
	  vectors
	  even if length 1.

2005-07-15 18:44  warnes

	* [r196] src/RPy.h: Changes to avoid redefinition errors on Win32.

2005-07-15 17:36  warnes

	* [r195] src/rpymodule.c: - Fix error (potential segfault!) when
	  handling conversion of
	  factor objects contining missing values

2005-07-15 17:28  warnes

	* [r194] tests/test_topy.py: Minor whitespace reformatting.

2005-07-15 17:28  warnes

	* [r193] rpy.py: - Fix bug in R.__call__ that could cause problems
	  when the 'r'
	  object is not present.

2005-07-15 17:23  warnes

	* [r192] tests/test_topy.py: Add tests for NA values.

2005-07-15 15:00  warnes

	* [r191] rpy.py: - The R integer 'NA' value is now accessible as
	  the 'NA' attribute of the
	  Python 'r' object.
	  - The R floating point 'NA' value is now accessible as the 'NAN'
	  attribute of the Python 'r' object.

2005-07-15 07:07  warnes

	* [r190] setup.py: Explicitly link to libRlapack to ensure this
	  library is found at
	  runtime. (Oddly simply adding -R<path> doesn't do the trick.)

2005-07-15 06:15  warnes

	* [r189] doc/Makefile: Explicitly call tex / makeinfo / pdflatex
	  twice to ensure that
	  toc/index are properly built.

2005-07-15 06:06  warnes

	* [r188] setup.py: - Display R path and version
	  - Append version string ('2010') to shared library/dll name so
	  that
	  multiple versions can colocate. This should ease packaging for
	  windows.

2005-07-15 05:35  warnes

	* [r187] rpy.py: Add code to try loading R-version specific _rpy
	  module on Win32.
	  This should make it easier to support multiple R versions with a
	  single distributed package.

2005-07-14 19:14  warnes

	* [r186] rpy.py: - On Windows, always look at the registry to see
	  where to
	  find the R DLL. This should avoid the nasty popup error message
	  when the DLL isn't on the path. Patch by Peter
	  (maubp@users.sourceforge.net)

2005-07-14 18:55  warnes

	* [r185] src/rpymodule.c: Fixes bug "[ 1238226 ] rpymodule.c needs
	  updating for R 2.1.1 or
	  later" (win32-specific)

2005-07-14 18:46  warnes

	* [r184] INSTALL.UNIX, INSTALL.WINDOWS, README: Move installation
	  instructions to separate files.

2005-07-14 17:45  warnes

	* [r183] tests/test_cleanup.py, tests/testall.py: Fix typo in
	  test_cleanup, remove special case for test_cleanup in testall.py

2005-07-14 17:43  warnes

	* [r182] rpy.py, src/rpymodule.c, tests/test_cleanup.py,
	  tests/test_init.py, tests/testscript_cleanup.py: - Move cleanup
	  call to python finalization rather than R object deletion.
	  - Split out testing of R init function from cleanup.
	  - Improve cleanup testing by using a separate python script.

2005-07-14 06:37  warnes

	* [r181] NEWS, rpy.py, rpy_io.py, rpy_version.py, setup.py,
	  src/RPy.h, src/io.c, src/rpymodule.c, tests/README,
	  tests/test_cleanup.py, tests/test_io.py, tests/testall.py: New
	  features
	  
	  - R source headers no longer needed, and are no longer included
	  in the source package
	  
	  - The R interpreter is propely shutdown on python exit or
	  deletion
	  all references. This ensures that all temporary directories and
	  files are removed
	  
	  Bug fixes:
	  
	  - Fix build error for R 2.0.0+ on Mac OSX ('darwin')
	  
	  - Previous versions of rpy have permitted multiple copies of the
	  R
	  interpreter wrapper to be instantiated (via "newR = rpy.R()" ).
	  However R's design imposes a limit of one interpreter per python
	  process. To avoid confusion on this point, attempts to
	  instantate more than one R interpreter object will now generate
	  RuntimeError exceptions.
	  
	  - r.help() now works as expected by users.
	  
	  Behind the scenes:
	  
	  - Some work has been done "under the hood" to allow an R
	  interpreter to be shut down and then started up again. This is
	  *not* currently working.

2005-01-04 15:12  warnes

	* [r174] src/rpymodule.c: - Remove 'statichere' prefix of Robj_Type
	  definition to resolve build
	  error under gcc 4.0. ('staticforward' and 'statichere' are used
	  for
	  defining and referencing static forward definitions,
	  respectively. Here, however, the definition of Robj_Type is the
	  first and only definitition.)

2004-12-23 00:13  warnes

	* [r172] TODO: Add a couple of items, enhance format.

2004-12-23 00:01  warnes

	* [r171] rpy.py, rpy_version.py, setup.py: - Provide version of
	  getstatuscommands for windows. Other trivial changes.

2004-11-08 18:03  warnes

	* [r160] rpy_version.py: Make that version 0.4.0!

2004-11-08 18:02  warnes

	* [r159] NEWS: Update for 0.4.0

2004-11-08 17:59  warnes

	* [r158] rpy_version.py: Update version number for 0.4.0.

2004-11-08 17:58  warnes

	* [r157] README, setup.py: We now attempt to bundle the R header
	  files needed to compile rpy.

2004-11-08 15:43  warnes

	* [r156] setup.py: One more change for R 2.0.0: libR.so now lives
	  in $RHOME/lib rather than
	  $RHOME/bin.

2004-11-02 00:27  nj7w

	* [r152] rpy_version.py: Update version number

2004-11-02 00:09  nj7w

	* [r151] NEWS: Update for release 0.3.6.

2004-11-01 23:56  nj7w

	* [r150] README, setup.py: Improve Windows installation
	  instructions & fix minor build problem.

2004-10-23 01:55  warnes

	* [r149] rpy_version.py, src/RPy.h, src/rpymodule.c: Second attempt
	  to get support for R 2.0.0 working.

2004-10-22 13:06  warnes

	* [r148] src/R_eval.c, src/rpymodule.c: Commit changes for
	  compatibility with (bug? in) R 2.0.0

2004-10-08 15:52  warnes

	* [r147] src/RPy.h, src/rpymodule.c: - Remove some redundant
	  includes from rpymodule.c
	  - Add 'getRHOME' function (not yet used).

2004-09-13 21:27  warnes

	* [r144] setup.py: Fix new typo.

2004-09-13 21:22  warnes

	* [r143] README, setup.py, src/rpymodule.c: - Changes to fix
	  compilation under Windows.
	  - Fix for typo in rpymodule.c

2004-08-23 21:18  warnes

	* [r142] doc/manual.texi: Fixed typos.

2004-06-14 20:59  warnes

	* [r141] src/RPy.h: Add Startup.h to unix build as well.

2004-06-14 20:56  warnes

	* [r140] src/rpymodule.c: Replace Python comment character with C
	  comment character. grrr.

2004-06-14 20:08  warnes

	* [r139] setup.py, src/rpymodule.c: Fix segfault on run due to
	  strangeness in quoting C DEFINES at build time.

2004-04-22 18:42  warnes

	* [r138] setup.py: Add configuration case for OSF to resolve linker
	  problem reported by Andrew Hill <ahill@wyeth.com>.

2004-02-27 17:05  warnes

	* [r137] rpy_io.py: Undelete.

2004-02-27 04:48  warnes

	* [r135] undelete.csh: Remove extraneous file.

2004-02-27 04:47  warnes

	* [r134] COPYING, MANIFEST.in, README, TODO, debian/changelog,
	  debian/control, debian/copyright, debian/rules, doc/Makefile,
	  doc/README, doc/defs.texi, doc/manual.texi, examples/README,
	  examples/animation.py, examples/chisquared.py,
	  examples/faithful.dat, examples/faithful.py,
	  examples/useful/dataframe.py, examples/useful/erobj.py, rpy.py,
	  rpy_io.py, rpy_version.py, setup.py, src/RPy.h, src/R_eval.c,
	  src/io.c, src/robjobject.h, src/rpymodule.c, src/setenv.c,
	  src/setenv.h, tests/README, tests/table.txt, tests/test_array.py,
	  tests/test_boolean.py, tests/test_io.py, tests/test_modes.py,
	  tests/test_numeric.py, tests/test_robj.py, tests/test_sigint.py,
	  tests/test_topy.py, tests/test_tor.py, tests/test_util.py,
	  tests/testall.py: - Remove windows line endings from files.
	  - Fix incorrect code for darwin build include in the windows
	  changes.
	  - It appears that PRE_2_2 needs to be set for 2.3 as well as 2.1
	  for
	  rpy to pass its unit tests. Does it need to be set for 2.2 as
	  well?
	  (I don't have a 2.2 hand to test with.)

2004-02-27 03:32  warnes

	* [r133] NEWS: Correct NEWS file for 0.3.5.

2004-02-27 03:08  warnes

	* [r132] README.sav, rpy_version.pyc, src/io.c.bak,
	  src/rpymodule.c.bak: Delete a few files accidentaly 'undeleted'

2004-02-27 03:01  warnes

	* [r131] rpy_version.pyc, src/io.c.bak, src/rpymodule.c.bak:
	  Undelete File

2004-02-27 02:58  warnes

	* [r130] COPYING, MANIFEST.in, NEWS, README, TODO, debian,
	  debian/changelog, debian/control, debian/copyright, debian/rules,
	  doc, doc/Makefile, doc/README, doc/defs.texi, doc/manual.texi,
	  examples/README, examples/animation.py, examples/chisquared.py,
	  examples/faithful.dat, examples/faithful.py,
	  examples/useful/dataframe.py, examples/useful/erobj.py, rpy.py,
	  rpy_io.py, rpy_version.py, setup.py, src, src/RPy.h,
	  src/R_eval.c, src/io.c, src/robjobject.h, src/rpymodule.c,
	  src/setenv.c, src/setenv.h, tests, tests/README, tests/table.txt,
	  tests/test_array.py, tests/test_boolean.py, tests/test_io.py,
	  tests/test_modes.py, tests/test_numeric.py, tests/test_robj.py,
	  tests/test_sigint.py, tests/test_topy.py, tests/test_tor.py,
	  tests/test_util.py, tests/testall.py: Undelete file

2004-02-27 02:41  warnes

	* [r126] README.sav, undelete.csh: Initial revision

2004-02-27 02:08  warnes

	* [r125] README: Undelete.

2004-02-19 22:13  warnes

	* [r124] README: Add note that all Windows specific code has been
	  integrated into the
	  main rpy tree.

2004-02-19 22:12  warnes

	* [r123] .cvsignore, COPYING, MANIFEST.in, NEWS, README, TODO,
	  debian, doc, rpy.py, rpy_io.py, rpy_version.py, setup.py, src,
	  tests: The Windows code is now integrated into the main RPy tree,
	  so these
	  files are no longer necessary.

2004-02-19 18:10  warnes

	* [r121] NEWS: Updated NEWS entries for 0.3.5.

2004-02-18 03:02  warnes

	* [r113] rpy_version.py: Update version number for 0.3.5 release.

2004-02-18 03:01  warnes

	* [r112] MANIFEST.in: Exclude .tgz and .tar.gz files from being
	  included in the distributed
	  packages.

2004-02-17 18:48  warnes

	* [r111] src/R_eval.c, src/rpymodule.c: - Fix defintions of symbols
	  used by other modules. These were
	  incorrectly marked 'extern'.

2004-02-17 18:45  warnes

	* [r110] tests/test_sigint.py: Force win32 to pass test_signint
	  test.

2004-02-17 18:15  warnes

	* [r109] setup.py: Jan de Leeuw recommends against -Xlinker -m, and
	  indicates that
	  -dynamic is the default.

2004-02-17 15:37  warnes

	* [r108] setup.py: Add linker flags that should enable rpy to build
	  on Mac OS X (darwin).

2004-02-12 17:12  warnes

	* [r107] rpy_version.py, setup.py: More changes to allow building
	  on Mac OSX.

2004-02-12 17:11  warnes

	* [r106] NEWS: Belated checkin of changes for RPy 0.3.4.

2004-02-12 02:37  warnes

	* [r105] src/RPy.h, src/R_eval.c, src/rpymodule.c: - Mark all
	  variable definitions in headers 'extern', and place actual
	  definitions in the appropriate source file. This should permit
	  compilation on Max OSX.

2004-02-10 20:57  warnes

	* [r104] setup.py: Patch to add build info for Mac OSX, submitted
	  by Christopher
	  Fonnesbeck <chris@fonnesbeck.org>. Its not yet quite right, but a
	  step in the right direction.

2004-02-04 21:26  warnes

	* [r95] rpy.py, setup.py: Finish renaming io.py to rpy_io.py.

2004-02-04 21:20  warnes

	* [r94] rpy.py: Fix crash on startup under win32 due to a typo that
	  caused the wrong
	  event-loop code to be executed..

2004-02-04 21:10  warnes

	* [r93] io.py, rpy_io.py: Renamed io.py to rpy_io.py to prevent
	  conflict with a file in the
	  python-stats package.

2004-02-04 21:06  warnes

	* [r92] debian, debian/changelog, debian/control, debian/copyright,
	  debian/rules: Add debian packaging files provided by Dirk
	  Eddelbuettel.

2004-01-21 06:25  warnes

	* [r86] MANIFEST.in: - Add a couple of trash file types to be
	  excluded from build packages

2004-01-21 06:18  warnes

	* [r85] MANIFEST.in: Make sure that the dist/ subdirectory doesn't
	  get included in the
	  source packages, otherwise we get HUGE packages because they
	  include
	  all previous packages.

2004-01-21 05:59  warnes

	* [r84] tests/test_robj.py: Fix test of lcall.

2004-01-21 05:53  warnes

	* [r83] rpy_version.py: - Update version number for release.

2004-01-21 05:50  warnes

	* [r82] src/RPy.h: Undo last change: remove #undef because it
	  caused compile faulures in
	  older python versions.

2004-01-21 05:42  warnes

	* [r81] tests/test_array.py, tests/test_boolean.py,
	  tests/test_io.py, tests/test_modes.py, tests/test_numeric.py,
	  tests/test_robj.py, tests/test_sigint.py, tests/test_topy.py,
	  tests/test_tor.py, tests/test_util.py: Modify tests so that they
	  operate on the local rpy rather than the
	  system installed copy. This makes it a lot easier to test
	  changes.

2004-01-21 05:40  warnes

	* [r80] src/RPy.h: Avoid warning message by undefining
	  _FILE_OFFSET_BITS to avoid
	  conflict between system defintion and python's definition.

2004-01-21 05:34  warnes

	* [r79] setup.py: Added runtime_library_dirs so that the rpy shared
	  library _rpy.so
	  includes the ncessary path to the R shared library Rlib.so. This
	  ensures that Rlib.so will be found even if it is not in
	  LD_LIBRARY_PATH.

2004-01-16 06:43  warnes

	* [r64] NEWS, README, TODO: Update text documentation files.

2004-01-16 06:43  warnes

	* [r63] doc/Makefile: Expand shell alternative patterns
	  "foo.{bar,baz}" to "foo.bar foo.baz"
	  because some shells used by make don't handle the former properly
	  (eg,
	  sh on Solaris 9).
	  
	  Add ignore return value flag (prepend '-') to "rm" commands,
	  since
	  absence of the file to be deleted is not a problem.

2004-01-16 06:38  warnes

	* [r62] doc/manual.texi: *** empty log message ***

2004-01-16 06:33  warnes

	* [r61] tests/test_robj.py: Improve documentation for lcall. Modify
	  unit test for lcall to be simpler.

2004-01-16 05:06  warnes

	* [r60] doc/manual.texi: Fix typos in manual.texi.

2004-01-16 05:04  warnes

	* [r59] doc/manual.texi: Add documentation of lcall method.

2004-01-16 05:00  warnes

	* [r58] src/rpymodule.c, tests/test_robj.py: Integrate patch
	  #720222: new RObj method 'lcall', which provides an
	  'lcall' method for calling objects with a list of (name,value)
	  arguments. This allows the programmer to work around Python's use
	  of
	  *unordered* dictionaries for named arguments.

2004-01-15 22:55  warnes

	* [r57] rpy_version.py, src/R_eval.c, src/rpymodule.c,
	  src/setenv.c: Minor changes for release of version 3.3.

2004-01-15 22:54  warnes

	* [r56] setup.py: Add quotes to allow for special characters in
	  RHOME path.

2004-01-15 22:51  warnes

	* [r55] tests/test_sigint.py: Rewrite to put signal sender code
	  into a function. Works now ?!

2004-01-15 22:45  warnes

	* [r54] tests/test_modes.py: Fix error in unit test.

2004-01-15 18:14  warnes

	* [r51] README, doc/Makefile: Added the creating of manual_html.tgz
	  for the web site.

2004-01-08 16:56  warnes

	* [r46] rpy_version.py, src/rpymodule.c: Fix bug under Unix due to
	  Win32 changes.

2004-01-08 16:18  warnes

	* [r45] README, rpy.py, rpy_version.py, setup.py, src/R_eval.c,
	  src/io.c, src/robjobject.h, src/rpymodule.c, src/setenv.c,
	  src/setenv.h, win, win/.cvsignore, win/readme, win/setup.py,
	  win/src/RPy.h, win/src/R_eval.c, win/src/setenv.c, win/version: -
	  Changes to work with R 1.8.X
	  - First attempt to integrate Windows changes into Unix source
	  tree
	  - Additional information for building under windows

2003-03-17 23:46  wall_m

	* [r44] src/rpymodule.c: Fixed a bug with the R's gc. It solves the
	  problems with large chunks of data.

2003-02-15 20:05  wall_m

	* [r42] README: Fixed wrong version

2003-02-15 19:52  wall_m

	* [r40] NEWS: Updated

2003-02-15 19:23  wall_m

	* [r38] src/rpymodule.c: Changed the sync mechanism to a lock.

2003-02-15 19:19  wall_m

	* [r37] doc/manual.texi: Some explanations about r('...') and
	  r_events.

2003-02-15 19:18  wall_m

	* [r36] setup.py: Using the rpy_version module.

2003-02-15 19:17  wall_m

	* [r35] VERSION, rpy_version.py: Changed VERSION for a module,
	  easier to import.

2003-02-15 19:16  wall_m

	* [r34] rpy.py: Now, using a lock to sync with R_eval. A lot
	  faster.

2003-02-15 19:15  wall_m

	* [r33] README: Added Kelley's contrib and fixed the minimum R
	  version.

2003-02-10 23:32  wall_m

	* [r27] src/io.c: * Fixed thread problems with Python i/o
	  callbacks.
	  * Enabled the event loop when reading input.

2003-02-10 23:29  wall_m

	* [r26] src/RPy.h: Added declarations.

2003-02-10 23:17  wall_m

	* [r25] MANIFEST.in: Some fixes.

2003-02-10 23:10  wall_m

	* [r24] setup.py: When building a source distro, substitute
	  $VERSION$ with the VERSION file
	  content.

2003-02-10 23:08  wall_m

	* [r23] src/R_eval.c: * Events are disables before entering R and
	  enabled after leaving R.
	  * If the event loop is stopped, the enable/disable doesn't
	  happen, which speed
	  up things a lot.
	  * Fixed a bug in do_eval_expr (executing Python code after
	  changing the SIGINT
	  handler).

2003-02-10 22:52  wall_m

	* [r22] src/rpymodule.c: * Fixed a bug about executing Python code
	  with a wrong SIGINT handler, in
	  do_eval_expr.
	  * Added handling of the event loop before and after the
	  evaluation of R
	  expresions.
	  * Speed up in the evaluation of R expresion when the event loop
	  is off.
	  * Disable the event loop when R is not interactive.
	  * Imported the rpy namespace, for easier access to the Python
	  functions.

2003-02-10 22:46  wall_m

	* [r21] rpy.py: Fixed the start/stop_r_eventloop problems.

2003-02-10 21:40  wall_m

	* [r20] README: Added win32all URL.

2002-11-19 20:43  wall_m

	* [r19] MANIFEST, MANIFEST.in, NEWS, README, TODO, VERSION,
	  doc/README, doc/manual.texi, io.py, rpy.py, setup.py, src/RPy.h,
	  src/R_eval.c, src/io.c, src/robjobject.h, src/rpymodule.c,
	  src/setenv.c, src/setenv.h, tests/test_boolean.py,
	  tests/test_io.py, tests/test_sigint.py, tests/test_topy.py:
	  Release 0.3, see the release notes or the NEWS file for changes
	  since 0.2.
	  Modified Files:
	  NEWS README TODO VERSION rpy.py setup.py doc/README
	  doc/manual.texi src/RPy.h src/R_eval.c src/robjobject.h
	  src/rpymodule.c tests/test_topy.py
	  Added Files:
	  MANIFEST.in io.py src/io.c src/setenv.c src/setenv.h
	  tests/test_boolean.py tests/test_io.py tests/test_sigint.py
	  Removed Files:
	  MANIFEST

2002-04-12 16:20  wall_m

	* [r18] NEWS, VERSION, tests, tests/.cvsignore: Added Files: NEWS
	  VERSION tests/.cvsignore

2002-04-12 16:18  wall_m

	* [r17] MANIFEST, README, RPy.h, R_eval.c, TODO, USING, doc,
	  doc/Makefile, doc/README, doc/defs.texi, doc/manual.texi,
	  examples, examples/README, examples/animation.py,
	  examples/chisquared.py, examples/faithful.dat,
	  examples/faithful.py, examples/useful,
	  examples/useful/dataframe.py, examples/useful/erobj.py,
	  robjobject.h, rpy.py, rpymodule.c, setup.py, src, src/RPy.h,
	  src/R_eval.c, src/robjobject.h, src/rpymodule.c, test-array.py,
	  test-numeric.py, test.py, tests, tests/README, tests/table.txt,
	  tests/test_array.py, tests/test_modes.py, tests/test_numeric.py,
	  tests/test_robj.py, tests/test_topy.py, tests/test_tor.py,
	  tests/test_util.py, tests/testall.py: Big changes and
	  reorganization. Due to being working in my own repository,
	  history is not available.

2002-03-18 18:02  wall_m

	* [r16] test-array.py, test-numeric.py: Fixed nested_scopes for
	  version 2.1

2002-03-18 17:59  wall_m

	* [r15] rpymodule.c: Fixed a C function call which is not in the
	  2.1 API

2002-03-18 17:21  wall_m

	* [r14] rpymodule.c: Lot of changes.
	  
	  * Added conversion from/to Numeric when available
	  * Fixed the conversion of data frames
	  * Added the conversion of R arrays from/to list of lists of ...
	  in the
	  case when Numeric is not available

2002-03-18 14:03  wall_m

	* [r13] rpy.py, rpymodule.c: Import Numeric when available
	  Fixed a bug in conversion of names.

2002-03-18 14:01  wall_m

	* [r12] setup.py: Added the detection of Numeric.

2002-03-18 13:58  wall_m

	* [r11] USING: Fixed minor typo.

2002-03-18 13:53  wall_m

	* [r10] RPy.h: Added the include of Numeric header when available.
	  Added the declaration of Rf_initEmbeddedR.

2002-03-18 13:35  wall_m

	* [r9] robjobject.h, test-array.py, test-numeric.py, test.py: Added
	  Files: robjobject.h test-array.py test-numeric.py test.py

2002-03-13 18:38  wall_m

	* [r8] rpymodule.c: * Fixed several important bugs.
	  
	  o Added a list for saving anonymous R objects
	  o Added several PROTECT's which were missing
	  o Fixed a bug related to signals that, when catch by R, makes
	  Python seg
	  fault

2002-03-09 03:01  wall_m

	* [r4] ., .cvsignore, COPYING, MANIFEST, README, RPy.h, R_eval.c,
	  TODO, USING, rpy.py, rpymodule.c, setup.py: Initial revision