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rsem 1.3.3%2Bdfsg-3
  • links: PTS, VCS
  • area: main
  • in suites: sid, trixie
  • size: 37,700 kB
  • sloc: cpp: 19,230; perl: 1,326; python: 1,245; ansic: 547; makefile: 186; sh: 154

Folder: pRSEM

d .. (parent)
d d rwxr-xr-x 4,096 idrCode
d d rwxr-xr-x 4,096 phantompeakqualtools
- - rw-r--r-- 8,875 ChIPSeqExperiment.py
- - rw-r--r-- 1,178 ChIPSeqReplicate.py
- - rw-r--r-- 1,256 File.py
- - rw-r--r-- 4,061 Gene.py
- - rw-r--r-- 840 Makefile
- - rw-r--r-- 7,500 Param.py
- - rw-r--r-- 9,851 Prsem.py
- - rw-r--r-- 6,030 Transcript.py
- - rw-r--r-- 3,915 Util.py
- - rw-r--r-- 1,498 filterSam2Bed.c
- - rw-r--r-- 1,903 installRLib.R
- - rw-r--r-- 1,622 process-chipseq.R
- - rw-r--r-- 37,817 process-rnaseq.R
- - rwxr-xr-x 2,160 prsem-calculate-expression
- - rwxr-xr-x 1,695 prsem-prepare-reference
- - rwxr-xr-x 3,279 prsem-testing-procedure