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= gfadiff(1)
:doctype: manpage
== NAME
gfadiff - compare two GFA files
== SYNOPSIS
*gfadiff* [-h] [-s] [-l] [-c] [-p] [-i] [-script] <gfa1> <gfa2>
== DESCRIPTION
If a combination of -h,-s,-l,-c and/or -p is specified, then
only record of the specified type [h=headers, s=segments,
l=links, c=containments, p=paths] are compared.
(default: -h -s -l -c -p)
== OTHER OPTIONS
*-i*::
output message if identical
*-script*::
create Ruby script to transform gfa1 into gfa2
== SEE ALSO
*rgfa-simdebruijn*(1), *rgfa-findcrispr*(1), *rgfa-mergelinear*(1)
== BUGS
Please report bugs to the RGFA issue tracker:
https://github.com/ggonnella/rgfa/issues
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