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#!/usr/bin/env python3
"""
t1_database.py - this file is part of S3QL.
Copyright © 2023 Nikolaus Rath <Nikolaus@rath.org>
This work can be distributed under the terms of the GNU GPLv3.
"""
if __name__ == "__main__":
import sys
import pytest
sys.exit(pytest.main([__file__] + sys.argv[1:]))
import logging
import math
import os
import tempfile
from argparse import Namespace
from typing import List
import pytest
from pytest_checklogs import assert_logs
from t2_block_cache import random_data
from s3ql import sqlite3ext
from s3ql.backends import local
from s3ql.backends.common import AbstractBackend
from s3ql.database import (
METADATA_OBJ_NAME,
Connection,
FsAttributes,
download_metadata,
expire_objects,
upload_metadata,
upload_params,
)
# Page size is 4k, so block sizes smaller than that don't make sense
BLOCKSIZE = 4096
# Make sure every row requires at least one block of storage
DUMMY_DATA = random_data(BLOCKSIZE)
def test_track_dirty():
rows = 11
sqlite3ext.reset()
with tempfile.NamedTemporaryFile() as tmpfh:
db = Connection(tmpfh.name, BLOCKSIZE)
db.execute("CREATE TABLE foo (id INT, data BLOB);")
for i in range(rows):
db.execute("INSERT INTO FOO VALUES(?, ?)", (i, DUMMY_DATA))
db.checkpoint()
assert db.dirty_blocks.get_count() >= rows
db.dirty_blocks.clear()
assert db.dirty_blocks.get_count() == 0
db.execute("UPDATE FOO SET data=? WHERE id=?", (random_data(len(DUMMY_DATA)), 0))
db.checkpoint()
assert rows > db.dirty_blocks.get_count() > 0
db.close()
def test_track_dirty_symlink():
rows = 11
sqlite3ext.reset()
with tempfile.TemporaryDirectory() as tmpdir:
os.mkdir(os.path.join(tmpdir, 'target'))
os.symlink('target', os.path.join(tmpdir, 'link'))
fname = os.path.join(tmpdir, 'link', 'testdb')
db = Connection(fname, BLOCKSIZE)
db.execute("CREATE TABLE foo (id INT, data BLOB);")
for i in range(rows):
db.execute("INSERT INTO FOO VALUES(?, ?)", (i, DUMMY_DATA))
db.checkpoint()
assert db.dirty_blocks.get_count() >= rows
db.dirty_blocks.clear()
assert db.dirty_blocks.get_count() == 0
db.execute("UPDATE FOO SET data=? WHERE id=?", (random_data(len(DUMMY_DATA)), 0))
db.checkpoint()
assert rows > db.dirty_blocks.get_count() > 0
db.close()
def test_track_dirty_count():
sqlite3ext.reset()
with tempfile.NamedTemporaryFile() as tmpfh:
db = Connection(tmpfh.name, BLOCKSIZE)
db.execute("CREATE TABLE foo (id INT);")
db.execute("INSERT INTO FOO VALUES(42)")
db.checkpoint()
db_size = tmpfh.seek(0, os.SEEK_END)
assert db.dirty_blocks.get_count() == math.ceil(db_size / BLOCKSIZE)
db.close()
@pytest.fixture
def backend():
with tempfile.TemporaryDirectory(prefix="s3ql-backend-") as backend_dir:
yield local.Backend(Namespace(storage_url="local://" + backend_dir))
@pytest.mark.parametrize("incremental", (True, False))
def test_upload_download(backend, incremental):
sqlite3ext.reset()
rows = 11
params = FsAttributes(
metadata_block_size=BLOCKSIZE,
data_block_size=BLOCKSIZE,
seq_no=1,
)
with tempfile.NamedTemporaryFile() as tmpfh:
db = Connection(tmpfh.name, BLOCKSIZE)
db.execute("CREATE TABLE foo (id INT, data BLOB);")
for i in range(rows):
db.execute("INSERT INTO foo VALUES(?, ?)", (i, DUMMY_DATA))
db.checkpoint()
upload_metadata(backend, db, params, incremental=incremental)
# Shrink database
db.execute('DELETE FROM foo WHERE id >= ?', (rows // 2,))
db.execute('VACUUM')
db.checkpoint()
upload_metadata(backend, db, params, incremental=incremental)
db.close()
with tempfile.NamedTemporaryFile() as tmpfh2:
download_metadata(backend, tmpfh2.name, params)
tmpfh.seek(0)
tmpfh2.seek(0)
assert tmpfh.read() == tmpfh2.read()
def test_checkpoint():
with tempfile.NamedTemporaryFile() as tmpfh:
db = Connection(tmpfh.name)
db.execute("CREATE TABLE foo (id INT);")
db.execute("INSERT INTO FOO VALUES(?)", (23,))
db.execute("INSERT INTO FOO VALUES(?)", (25,))
db.execute("INSERT INTO FOO VALUES(?)", (30,))
db.checkpoint()
q = db.query('SELECT * FROM foo')
db.execute("INSERT INTO FOO VALUES(?)", (35,))
with assert_logs('^Unable to checkpoint WAL', count=1, level=logging.WARNING):
with assert_logs(
'^sqlite3: statement aborts at.+SQLITE_LOCKED', count=1, level=logging.WARNING
):
db.checkpoint()
q.close()
db.checkpoint()
db.close()
def get_metadata_obj_count(backend: AbstractBackend):
i = 0
for _ in backend.list('s3ql_metadata_'):
i += 1
return i
def test_versioning(backend):
sqlite3ext.reset()
rows = 11
params = FsAttributes(
metadata_block_size=BLOCKSIZE,
data_block_size=BLOCKSIZE,
seq_no=1,
)
versions = []
with tempfile.NamedTemporaryFile() as tmpfh:
db = Connection(tmpfh.name, BLOCKSIZE)
db.execute("CREATE TABLE foo (id INT, data BLOB);")
for i in range(rows):
db.execute("INSERT INTO foo VALUES(?, ?)", (i, DUMMY_DATA))
def upload():
db.checkpoint()
upload_metadata(backend, db, params)
tmpfh.seek(0)
versions.append((params.copy(), tmpfh.read()))
params.seq_no += 1
upload()
base_count = len(list(backend.list('s3ql_metadata_')))
# Make some modifications
db.execute('INSERT INTO foo(id, data) VALUES(?, ?)', (rows + 1, b'short data'))
upload()
db.execute('INSERT INTO foo(id, data) VALUES(?, ?)', (2 * rows + 1, DUMMY_DATA))
upload()
db.execute("UPDATE FOO SET data=? WHERE id=?", (random_data(len(DUMMY_DATA)), 0))
db.execute("UPDATE FOO SET data=? WHERE id=?", (random_data(len(DUMMY_DATA)), rows // 2))
upload()
db.execute('DELETE FROM foo WHERE id >= ?', (rows // 2,))
db.execute('VACUUM')
upload()
db.close()
for params, ref_db in versions:
with tempfile.NamedTemporaryFile() as tmpfh2:
download_metadata(backend, tmpfh2.name, params)
assert tmpfh2.read() == ref_db
# Make sure that we did not store a full copy of every version
obj_count = len(list(backend.list('s3ql_metadata_')))
versions = len(versions) - 1
assert obj_count - base_count <= versions * base_count * 0.5
def _test_expiration(
backend: AbstractBackend,
contents_pre: List[List[int]],
contents_post: List[List[int]],
db_sizes: List[int],
versions_to_keep: int,
):
id_seq_map = {}
for blockno, versions in enumerate(contents_pre):
assert len(db_sizes) == len(versions)
last_id = None
for seq_no, block_id in enumerate(versions):
if last_id != block_id:
last_id = block_id
if block_id is None:
continue
block_seq_no = seq_no
id_seq_map[(blockno, block_id)] = block_seq_no
backend[METADATA_OBJ_NAME % (blockno, block_seq_no)] = str(block_id).encode()
for seq_no, size in enumerate(db_sizes):
params = FsAttributes(
metadata_block_size=BLOCKSIZE,
seq_no=seq_no,
db_size=BLOCKSIZE * size,
data_block_size=BLOCKSIZE,
)
upload_params(backend, params)
expire_objects(backend, versions_to_keep=versions_to_keep)
expected_objects = set()
for blockno, versions in enumerate(contents_post):
for block_id in versions:
if block_id is None:
continue
block_seq_no = id_seq_map[(blockno, block_id)]
expected_objects.add(METADATA_OBJ_NAME % (blockno, block_seq_no))
all_objs = set(backend.list('s3ql_metadata_'))
assert expected_objects == all_objs
def test_expiration_nodup(backend):
# Trivial case, every block is stored in every version
contents_pre = [
[10, 11, 12, 13, 14, 15], # block 0
[20, 21, 22, 23, 24, 25], # block 1
[30, 31, 32, 33, 34, 35], # block 2
[40, 41, 42, 43, 44, 45], # block 3
]
db_sizes = [4, 4, 4, 4, 4, 4]
contents_post = [
[13, 14, 15], # block 0
[23, 24, 25], # block 1
[33, 34, 35], # block 2
[43, 44, 45], # block 3
]
_test_expiration(backend, contents_pre, contents_post, db_sizes=db_sizes, versions_to_keep=3)
def test_expiration_dup1(backend):
# Some old blocks are used repeatedly, but all expired
contents_pre = [
[10, 11, 12, 13, 14, 15], # block 0
[20, 20, 20, 21, 22, 23], # block 1
[30, 31, 32, 33, 34, 35], # block 2
[40, 40, 41, 42, 43, 44], # block 3
]
db_sizes = [4, 4, 4, 4, 4, 4]
contents_post = [
[13, 14, 15], # block 0
[21, 22, 23], # block 1
[33, 34, 35], # block 2
[42, 43, 44], # block 3
]
_test_expiration(backend, contents_pre, contents_post, db_sizes=db_sizes, versions_to_keep=3)
def test_expiration_dup2(backend):
# Some old blocks are used repeatedly and thus not removed
contents_pre = [
[10, 11, 12, 13, 14, 15], # block 0
[20, 20, 20, 21, 22, 23], # block 1
[30, 31, 32, 33, 34, 35], # block 2
[40, 40, 41, 42, 43, 44], # block 3
]
db_sizes = [4, 4, 4, 4, 4, 4]
contents_post = [
[12, 13, 14, 15], # block 0
[20, 21, 22, 23], # block 1
[32, 33, 34, 35], # block 2
[41, 42, 43, 44], # block 3
]
_test_expiration(backend, contents_pre, contents_post, db_sizes=db_sizes, versions_to_keep=4)
def test_expiration_dup3(backend):
# Some new blocks are used repeatedly
contents_pre = [
[10, 11, 12, 13, 13, 13], # block 0
[20, 20, 20, 21, 22, 22], # block 1
[30, 31, 32, 33, 34, 35], # block 2
[40, 40, 41, 42, 43, 44], # block 3
]
db_sizes = [4, 4, 4, 4, 4, 4]
contents_post = [
[13, 13, 13], # block 0
[21, 22, 22], # block 1
[33, 34, 35], # block 2
[42, 43, 44], # block 3
]
_test_expiration(backend, contents_pre, contents_post, db_sizes=db_sizes, versions_to_keep=3)
def test_expiration_smaller(backend):
# Database size reduced
contents_pre = [
[10, 11, 12, 13, 14, 15], # block 0
[20, 21, 22, 23, 24, 25], # block 1
[30, 31, 32, 33, None, None], # block 2
[40, 41, 42, None, None, None], # block 3
]
db_sizes = [4, 4, 4, 3, 2, 2]
contents_post = [
[13, 14, 15], # block 0
[23, 24, 25], # block 1
[33, None, None], # block 2
]
_test_expiration(backend, contents_pre, contents_post, db_sizes=db_sizes, versions_to_keep=3)
def test_expiration_downup(backend):
# Database size reduced and then increased again
contents_pre = [
[10, 11, 12, 13, 13], # block 0
[20, 21, 23, 23, 24], # block 1
[30, 31, None, 33, 34], # block 2
[40, None, None, 40, None], # block 3
]
db_sizes = [4, 3, 2, 4, 3]
contents_post = [
[12, 13, 13], # block 0
[23, 23, 24], # block 1
[None, 33, 34], # block 2
[None, 40, None], # block 3
]
_test_expiration(backend, contents_pre, contents_post, db_sizes=db_sizes, versions_to_keep=3)
@pytest.mark.parametrize("incremental", (True, False))
def test_download_shorter(backend, incremental):
# Test downloading older snapshot when the filesize has grown
sqlite3ext.reset()
params = FsAttributes(
metadata_block_size=BLOCKSIZE,
data_block_size=BLOCKSIZE,
seq_no=1,
)
with tempfile.NamedTemporaryFile() as tmpfh:
db = Connection(tmpfh.name, BLOCKSIZE)
db.execute("CREATE TABLE foo (id INT, data BLOB);")
for i in range(2):
db.execute("INSERT INTO foo VALUES(?, ?)", (i, DUMMY_DATA))
db.checkpoint()
upload_metadata(backend, db, params, incremental=incremental)
old_params = params.copy()
params.seq_no += 1
# Grow database
for i in range(2, 6):
db.execute("INSERT INTO foo VALUES(?, ?)", (i, DUMMY_DATA))
db.checkpoint()
upload_metadata(backend, db, params)
db.close()
with tempfile.NamedTemporaryFile() as tmpfh:
download_metadata(backend, tmpfh.name, old_params)
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