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sambamba 1.0%2Bdfsg-1
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sambamba(1) -- toolkit for working with SAM/BAM files
==========================================================

## SYNOPSIS

`sambamba` [subcommand] [arguments...]

## DESCRIPTION

`sambamba` unifies several independent tools in one executable:

* sambamba-view(1)
* sambamba-index(1)
* sambamba-merge(1)
* sambamba-sort(1)
* sambamba-markdup(1)
* sambamba-flagstat(1)
* sambamba-slice(1)
* sambamba-pileup(1)

Thus available subcommands are *view*, *index*, *merge*, *sort*, *markdup*, 
*flagstat*, *slice*, and *mpileup*. Their use is explained on the corresponding man pages.

Note that sambamba uses all available cores by default.