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#!/usr/bin/env python3
template = """package:
name: sambamba
version: '{version}'
source:
fn: sambamba_v{version}.tar.bz2
url: {linux_url} # [linux]
md5: {linux_md5} # [linux]
url: {osx_url} # [osx]
md5: {osx_md5} # [osx]
build:
number: 0
requirements:
build:
run:
- samtools # required for mpileup
- bcftools # required for mpileup
test:
commands:
- sambamba view
about:
home: https://github.com/biod/sambamba
license: GPLv2
summary: Tools for working with SAM/BAM data"""
import json
from urllib.request import urlopen
from hashlib import md5
latest_release = json.loads(urlopen("https://api.github.com/repos/biod/sambamba/releases").read())[0]
sambamba_version = latest_release['tag_name'][1:]
downloads = {}
for asset in latest_release['assets']:
url = asset['browser_download_url']
platform = asset['name'].split(sambamba_version)[1].split(".")[0][1:]
downloads[platform] = url
def md5sum(download):
h = md5()
h.update(urlopen(download).read())
return h.hexdigest()
linux_md5 = md5sum(downloads['linux'])
osx_md5 = md5sum(downloads['osx'])
print template.format(version=sambamba_version,
linux_url=downloads['linux'],
osx_url=downloads['osx'],
linux_md5=linux_md5, osx_md5=osx_md5)
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