1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
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@HD VN:1.5 SO:queryname SS:queryname:natural
@SQ SN:1 LN:249250621 M5:1b22b98cdeb4a9304cb5d48026a85128 UR:/nfs/srpipe_references/references/Human/1000Genomes_hs37d5/all/fasta/hs37d5.fa
@PG ID:samtools PN:samtools VN:1.19.2-19-g11384b23-dirty CL:samtools sort -Osam -n ../samtools/_sort.sam
a 64 1 999 60 151M * 0 0 * *
a 68 1 999 60 151M * 0 0 * *
a 2112 1 999 60 151M * 0 0 * *
a 320 1 999 60 151M * 0 0 * *
a 2368 1 999 60 151M * 0 0 * *
a 128 1 999 60 151M * 0 0 * *
a 2176 1 999 60 151M * 0 0 * *
a 384 1 999 60 151M * 0 0 * *
a 2432 1 999 60 151M * 0 0 * * cc:Z:reversed order
b 68 1 999 60 151M * 0 0 * * cr:Z:read1 cc:Z:correct order
b 64 1 999 60 151M * 0 0 * * cr:Z:read1 cc:Z:correct order
b 2112 1 999 60 151M * 0 0 * *
b 320 1 999 60 151M * 0 0 * *
b 2368 1 999 60 151M * 0 0 * *
b 128 1 999 60 151M * 0 0 * * cr:Z:read2 cc:Z:correct order
b 2176 1 999 60 151M * 0 0 * *
b 384 1 999 60 151M * 0 0 * *
b 2432 1 999 60 151M * 0 0 * *
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